Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0590 ATGGGGTGCTGCTTAAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCAATGGTTTGAGTTCAAAGGATGGTAACAAGGAAGAAGATGGCTTAAGCAGCAAGGTCTCAACTCCCTCCGATCCTCCAACTCCACGGACGGAGGGAGAGATCTTGAAGTCTTCAAACATGAAGAGCTTCAACTTCAGTGAGCTAAAAACTGCTACAAGGAACTTTCGTCCGGATAGTGTGGTGGGTGAAGGTGGGTTTGGTTGTGTTTTTAAGGGGTGGATTGATGAACAGACACTTGCACCAGTTAGACCAGGGACTGGCATGGTCATTGCTGTTAAGAGGCTTAACCAAGAAGGTCTGCAGGGACACAGTGAATGGTTGACAGAAATTAATTATCTGGGGCAGCTGCGTCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTAGAGGACGATCAACGGCTTTTGGTGTATGAGTTTTTGACCAAAGGAAGTTTGGATAATCATTTATTTAGGAGAGCTTCTTACTTTCAACCACTTTCTTGGAACTTCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCATAGCGATGAAGCAAAAGTGATATATCGAGACTTCAAAGCTTCAAATATCTTACTTGATTCGAATTACAATGCAAAACTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGCTGGTGATAAGAGCCATGTCTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATGGCCACAGGTCACTTGACAAAGAAGAGTGATGTATACAGCTTCGGGGTTGTTCTGCTTGAAATTATGTCCGGCAAACGTGCACTTGACAGCAACAGGCCAAGTGGGGAGCACAATTTAATTGAATGGGCCAAACCTTACCTCAGCAACAAGCGCAGGATCTTCCAAGTCATGGATGCGCGCATTGAAGGCCAATACACGTTGCGCGAATCAATGAAAGTAGCCAACCTTGCCATTCAATGTCTGTCTGTGGAACCAAGATTTAGACCAAAAATGGATGAAGTGGTGAGAGCATTAGAGGAACTTCAGGATTCAGAAGACAGAGCTGGAGGGGTGGGAAGCTCTCGAGATCAAACTGCTAGAAGGAGTGGCCATAGCTCAAGCAGCAGTGGGCCTAGACAACATAGAGGTAGACAACATGAAACAACAAGGAAGTGA 1200 0.4542 MGCCLSARIKAESPPRNGLSSKDGNKEEDGLSSKVSTPSDPPTPRTEGEILKSSNMKSFNFSELKTATRNFRPDSVVGEGGFGCVFKGWIDEQTLAPVRPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLRHPNLVKLIGYCLEDDQRLLVYEFLTKGSLDNHLFRRASYFQPLSWNFRMKVALDAAKGLAYLHSDEAKVIYRDFKASNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDSNRPSGEHNLIEWAKPYLSNKRRIFQVMDARIEGQYTLRESMKVANLAIQCLSVEPRFRPKMDEVVRALEELQDSEDRAGGVGSSRDQTARRSGHSSSSSGPRQHRGRQHETTRK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0590 399 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Gso14g0590 399 MobiDBLite consensus disorder prediction 1 52 - -
Gso14g0590 399 MobiDBLite consensus disorder prediction 354 399 - -
Gso14g0590 399 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0590 399 CDD STKc_IRAK 77 356 - -
Gso14g0590 399 Gene3D Transferase(Phosphotransferase) domain 1 157 375 - -
Gso14g0590 399 MobiDBLite consensus disorder prediction 31 52 - -
Gso14g0590 399 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Gso14g0590 399 SUPERFAMILY Protein kinase-like (PK-like) 47 353 IPR011009 -
Gso14g0590 399 PANTHER KINASE 1B 22 397 - -
Gso14g0590 399 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Gso14g0590 399 PANTHER OS01G0588500 PROTEIN-RELATED 22 397 - -
Gso14g0590 399 MobiDBLite consensus disorder prediction 370 387 - -
Gso14g0590 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0590 Gso-Chr14 5747704 5752150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0590 15 353 Glycoside Hydrolase AT3G07070 47.701 2.43e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso14g0590 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0590 - - gmx:100775335 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0590 14 5747704 5752150 Gso2g2109 2 45693949 45699204 GST
Gso18g0336 18 3180851 3185026 Gso14g0590 14 5747704 5752150 PCT
Gso13g1281 13 28122558 28126479 Gso14g0590 14 5747704 5752150 PCT
Gso14g0590 14 5747704 5752150 Gso18g0336 18 3180851 3185026 PCT
Gso14g0590 14 5747704 5752150 Gso13g1281 13 28122558 28126479 PCT