Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0575 ATGGCTTCAAACTCACACAACAATAACAAGGAAAATTCTTCTTCTTGGACACGCATGCAGAACAAGCAATTCGAAAGCGCACTTGCCTTGTATGATCAAGACACCCCAGATCGATGGCAAAACATAGCAAAAGTGGTTGGTGATAAATCGGCTGAGGAAGTGAAGAGACACTATGAAATCCTTTTGGAGGACCTTAGCCATATAGAGTCTGGACGTGTTCCAATTCCCAGCTATAAGTCCACAGATAACAATGAAGAGAGGCCTCTCAAGTATCTTAATCAGCATTGA 288 0.4236 MASNSHNNNKENSSSWTRMQNKQFESALALYDQDTPDRWQNIAKVVGDKSAEEVKRHYEILLEDLSHIESGRVPIPSYKSTDNNEERPLKYLNQH* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0575 95 MobiDBLite consensus disorder prediction 71 95 - -
Gso14g0575 95 CDD SANT 15 62 IPR001005 -
Gso14g0575 95 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Gso14g0575 95 SMART sant 12 64 IPR001005 -
Gso14g0575 95 Gene3D - 7 75 - -
Gso14g0575 95 SUPERFAMILY Homeodomain-like 15 68 IPR009057 -
Gso14g0575 95 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Gso14g0575 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Gso14g0575 95 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0575 Gso-Chr14 5546566 5549332 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso14g0575 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0575 - - gmx:100788168 192.586