Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0572 ATGGCGAATCGTTGGTGGGCCGGGAGCGCGACGGTGAAGCCCAGTGAACAAGACAACGGTGACAACAACGGTACTCCCACCAACAGTGGGAACAGTAACACCAACGTTAACGCGGTTCTCGAGGACGACGCAAACACCAACGAGCGCGACGGCGAAGAGCAGACCCTCAGCGGCGGGCGGCGGCCGCGTGGCAGGCCGCCAGGGTCAAAGAACAAGCCAAAGCCGCCGGTGGTGATAACGAAAGAGAGCCCCTACGCGCTCTGCAGCCACATCCTTGAGATCAGCGACGGCAGCGACGTGGCTGAGTGCATTGCTATCTTCGCCACGCGCCGCCACCGCGGCGTCTCAGTCCTCAGCGGCAACGGTTTCGTCACCAACGTCACGCTCCGGCAGCCGGCGGCCCCTGGAGGGGTCATCACCCTCCAGGGGCGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTCCTGCCGGCGCCTTCGCCGCCGGAGGCCACCGGACTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTGGTCGGAGGAAGCGTGGTGGGACCCCTTGTCACCTCGGGGCCGGTGATTGTTGTTGCTGCTACTTTCGCTAATGCTACCTATGAAAGGTTGCCTTTGGAGGATGAAAAAGGTGAAGAGGACATGCAAGAGGTGAATGAAGGTGATGGTGGTGGAACATCACCACCACAACCACCACCACCACCACCACCACCTTCACAAGGTGAACAACAGGTTTCAATGCCGGTGTATAATTTGGTGCCTAATAATGGTGATGTGTTTTGGGGGCCTCCATCTTCACCTTCTAATTATTGA 822 0.6022 MANRWWAGSATVKPSEQDNGDNNGTPTNSGNSNTNVNAVLEDDANTNERDGEEQTLSGGRRPRGRPPGSKNKPKPPVVITKESPYALCSHILEISDGSDVAECIAIFATRRHRGVSVLSGNGFVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLVTSGPVIVVAATFANATYERLPLEDEKGEEDMQEVNEGDGGGTSPPQPPPPPPPPSQGEQQVSMPVYNLVPNNGDVFWGPPSSPSNY* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0572 273 MobiDBLite consensus disorder prediction 229 245 - -
Gso14g0572 273 PIRSF ESCAROLA 6 264 IPR014476 GO:0003680
Gso14g0572 273 MobiDBLite consensus disorder prediction 10 42 - -
Gso14g0572 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 212 - -
Gso14g0572 273 MobiDBLite consensus disorder prediction 207 273 - -
Gso14g0572 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 273 - -
Gso14g0572 273 MobiDBLite consensus disorder prediction 43 59 - -
Gso14g0572 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 273 IPR014476 GO:0003680
Gso14g0572 273 MobiDBLite consensus disorder prediction 1 78 - -
Gso14g0572 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 200 IPR005175 -
Gso14g0572 273 Gene3D - 89 220 - -
Gso14g0572 273 CDD DUF296 90 171 IPR005175 -
Gso14g0572 273 ProSiteProfiles PPC domain profile profile. 82 222 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0572 Gso-Chr14 5501511 5503318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0572 1 233 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.379 6.07e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0572 - - gmx:100787100 452.981