Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0570 ATGGAGGGATCTAATGACTCTCAGTACTGGATGTATGTGAAGAGAGAACAAATCCTGAAGCCACAGTACTCACACCTTGAAGCAGCAGTTGGAGATGTCATTAACAACAATTTCTCATGGGAAGAAAGAGCTTTTGCAGAAGATGCGGCTAGATTACATGGTGGGAGCATGTGGCCTCAAAGATCTTACTCTTGCACCTTTTGCACAAGAGACTTCAAATCTGCTCAAGCCCTTGGGGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAAAATCATCACAAAAATGATCATTTCATCAAATCCTTATTATTAGGTAATAACCATCACTTTTTATCTGCACCAGAAATCTCCACCCAGTTAGATTGTGGTTTTACTCATGCTTGTTATTCTAGCCCTGCAACTACAATCACAACAACCAGGCTCTCATGTATATCATCCACACAAGAAAATTGTGGCGACCATAATTTTTCACCTTCTTCTTCAATTATCTTGGGCCATGTAGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGAGTACAAATTTAATGGCTTGGGAGGTAGCAATTATGTTGAAACAAGTTTGTCCGTGGGACTGACTTCAATGTTTGGCCAAAAATCATCATCACCAGCCGTTCCTTGTGGGGACAGATTCAACAATAGTTGCAAGAGGCTAAAGAGTAGCATTTCTTCTCAGCCTCTCTTCCTCAAGCCATGTTCAAATGATAAAAGCTCGGATTTTAAACCTGTGGAACATGGAATGGAGTACTTGGATCTTGAACTCAGGCTAGGGAAACAACAGCAAGTTAAGTAG 834 0.4173 MEGSNDSQYWMYVKREQILKPQYSHLEAAVGDVINNNFSWEERAFAEDAARLHGGSMWPQRSYSCTFCTRDFKSAQALGGHMNIHRRDRARLKQNHHKNDHFIKSLLLGNNHHFLSAPEISTQLDCGFTHACYSSPATTITTTRLSCISSTQENCGDHNFSPSSSIILGHVGSPNSEQEGVVKAREYKFNGLGGSNYVETSLSVGLTSMFGQKSSSPAVPCGDRFNNSCKRLKSSISSQPLFLKPCSNDKSSDFKPVEHGMEYLDLELRLGKQQQVK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0570 277 PANTHER OS07G0101800 PROTEIN 2 276 - -
Gso14g0570 277 Gene3D Classic Zinc Finger 41 110 - -
Gso14g0570 277 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 276 - -
Gso14g0570 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Gso14g0570 277 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Gso14g0570 277 SUPERFAMILY beta-beta-alpha zinc fingers 60 90 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0570 Gso-Chr14 5471517 5472710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0570 35 94 C2H2 Transcription Factor Family AT2G37740 73.333 9.38e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso14g0570 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0570 - - gmx:102662367 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0570 14 5471517 5472710 Gso2g2128 2 45928767 45929627 GST
Gso18g0316 18 2889707 2891036 Gso14g0570 14 5471517 5472710 PCT
Gso13g1303 13 28434226 28435381 Gso14g0570 14 5471517 5472710 PCT