Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0569 ATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCATCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGAGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCCAAGTAGCGGGAGGGCGCGTGATATATTGGGACGGACCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACTGAGCGTAGTGAGGAGGATGAGTGTTTGATATTAGGGAGTGATGGGCTATGGGACACAGTGCAAAACGACATCGCATGCAAAGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGCCATCGCCGCCCTCGTCTCCGAGGAGGGAGATGGCGGTGGACTGCTCCGACAAGGCTTGCTCCAACGCCTCCATTCTGCTGACCAAATTGGCGTTGGTTAGGCAGAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAACCTAA 1203 0.5411 MAGICCGVVGEAAETSSPIEPTSRPSARRSLDLLPLKYIAADVSVPPLENSRKRQRLDRRASPARECDNAVHSSKSKVVEVVPNYSSKSPTLDSTSPTVVEEYPRYGVTSVCGRRRDMEDAVSVHPSFCQETLSHDKKLGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHQAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNNVAVPLSDDHKPDRPDELLRIQVAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLILGSDGLWDTVQNDIACKVVRMCLNAQKPPSPPSSPRREMAVDCSDKACSNASILLTKLALVRQSSDNVSVVVVDLRRT* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0569 400 MobiDBLite consensus disorder prediction 49 72 - -
Gso14g0569 400 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Gso14g0569 400 SMART PP2C_SIG_2 125 397 IPR001932 -
Gso14g0569 400 SMART PP2C_4 95 395 IPR001932 -
Gso14g0569 400 Pfam Protein phosphatase 2C 105 371 IPR001932 -
Gso14g0569 400 CDD PP2Cc 105 346 IPR001932 -
Gso14g0569 400 ProSiteProfiles PPM-type phosphatase domain profile. 105 397 IPR001932 -
Gso14g0569 400 SUPERFAMILY PP2C-like 92 398 IPR036457 -
Gso14g0569 400 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 24 399 - -
Gso14g0569 400 Gene3D - 94 400 IPR036457 -
Gso14g0569 400 PANTHER ALPHABET, ISOFORM E-RELATED 24 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0569 Gso-Chr14 5459152 5461460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0569 1 345 PP2C-type Phosphatase Gene Family AT3G11410 60.894 1.01e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0569 K14497 - gmx:100781388 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0569 14 5459152 5461460 Gso2g2129 2 45946091 45948189 GST
Gso18g0307 18 2802884 2804863 Gso14g0569 14 5459152 5461460 PCT
Gso13g1313 13 28548964 28550956 Gso14g0569 14 5459152 5461460 PCT
Gso14g0569 14 5459152 5461460 Gso18g0307 18 2802884 2804863 PCT
Gso14g0569 14 5459152 5461460 Gso13g1313 13 28548964 28550956 PCT