Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0563 ATGGGGCAGAAGCAGCGTTCGAGTTCCGATGCCGACAACGAAGTCAAGAAACGACGCCGTGTTGGTTTCTCAGGCGTTGATTCTGGAGTTGAGGCCAAAGACTGCATCACAATCTATCTAGTTTCAAGCAAGGAAGAATTCGATGCTCCAGAGAGTTTTGTCATTCATCCTGTGGATCTGAATAGCTTTTTTGATGATGATGGGAAAATTTATGGCTATGAGGGTTTGAAGATTACCATCTGGGTTAGCAGCATATCATTTTATGCATATGCTGATATTACATTCCAGAGTTCATCTGATCGAGGCAAAGGGGTCACAGATTTGAAATCTGCTCTTCAGACAATTTTTGCTGAGACTCTTGTTGATAGCAAGGATGAATTCCTTCAGAAATATTTGGTGGATAACGACTTTGTTAGAACAAACATCTCAAATGGAGAAGCTTTGAAGCACAAAGCTTTCCAGGGGAACATTTCTGATTATAATCCACATACAGATTCATCTACTTCTACTGTTGAGGTTGTCCGTTTGGTGGCAGGCAACATGACTACTGGACAACTTTACAGTCATCTAATACCCCTCACACTACTTCTCGTTGATGGTAGCAGTCCTATTGATGTTACTGATTCACAGTGGGAGCTGTATGTTTTGTGTCAGAAGAAAACTGATCCGCAGGGAGAGATCCAATGTAGGTTGATTGGTTTTACTGCTGTTTATCGATTTTATCACTATCCTGATGATTCCCGATTACGACTAAGCCAGATACTGGTATTACCTCCTTACCAGCACAAGGGTTATGGTCGATTCCTTCTAGAGGTGCTATATGATGTTGCTATATCTGAAAATGTTTTTGACTTCACGGTAGAAGAGCCATTAGATCACTTCCAACATGTTCGTACTTGTGTTGACTCACTTCGCCTGCTTCAGTTTTACCCAATTCAGAATATAGTTACTAAAGCTGTTTCACTTCTGAAGCAAGGAAAGTTATCAAAGAAAGCAAATTGTCCTCGACTTTTGCCACCTCCCAGCGCAATTGAGGATGTTAGGAAAAGTCTGAAAATTAACAAGCAGCAGTTTCTCCAGTGTTGGGAGGTTTTGATCTACATTGGCCTTAATCCTGTTGACAAGAACACGGAGAACTTTGTTAGTATTATTTTGAACCGTGTTAAGTATGATATCTTAGGGAAAGATTCTGGGACGTCTGGGAAGCAGCTTATTGAAGTACCAAGTGATGTTGATCAGGAGATGTCATTTGTCATGTTCAGATCAGAAGCCAACGAAGCTAGTAGTGTGCAAATGGATGACAATCAGGCTAATCAAGAAGAGCAACTCCAGAGGTTAGTTCAGGAAAGGGTGAAAGAAATTCAGTTGATTGCGGAAAAGGTAACCCTGCATCTTGGGAGCTCAGGGGTGGTGGTTAATTAG 1422 0.4142 MGQKQRSSSDADNEVKKRRRVGFSGVDSGVEAKDCITIYLVSSKEEFDAPESFVIHPVDLNSFFDDDGKIYGYEGLKITIWVSSISFYAYADITFQSSSDRGKGVTDLKSALQTIFAETLVDSKDEFLQKYLVDNDFVRTNISNGEALKHKAFQGNISDYNPHTDSSTSTVEVVRLVAGNMTTGQLYSHLIPLTLLLVDGSSPIDVTDSQWELYVLCQKKTDPQGEIQCRLIGFTAVYRFYHYPDDSRLRLSQILVLPPYQHKGYGRFLLEVLYDVAISENVFDFTVEEPLDHFQHVRTCVDSLRLLQFYPIQNIVTKAVSLLKQGKLSKKANCPRLLPPPSAIEDVRKSLKINKQQFLQCWEVLIYIGLNPVDKNTENFVSIILNRVKYDILGKDSGTSGKQLIEVPSDVDQEMSFVMFRSEANEASSVQMDDNQANQEEQLQRLVQERVKEIQLIAEKVTLHLGSSGVVVN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0563 473 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 27 368 IPR016181 -
Gso14g0563 473 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 462 IPR017380 GO:0004402|GO:0005634|GO:0016573|GO:0031509
Gso14g0563 473 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 462 - -
Gso14g0563 473 Coils Coil 429 449 - -
Gso14g0563 473 Gene3D - 142 298 - -
Gso14g0563 473 CDD NAT_SF 226 282 - -
Gso14g0563 473 Pfam Histone acetyl transferase HAT1 N-terminus 30 199 IPR019467 GO:0006325
Gso14g0563 473 Pfam MOZ/SAS family 209 295 IPR002717 GO:0004402|GO:0006355|GO:0016573
Gso14g0563 473 Gene3D - 33 199 IPR037113 GO:0006325
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0563 Gso-Chr14 5393962 5398079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0563 213 291 C2H2 Transcription Factor Family AT5G64610 34.177 8.03e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0563 K11303 - gmx:100820418 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0563 14 5393962 5398079 Gso2g2135 2 46005987 46010080 GST