Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0552 ATGATCTCTGTAGGCTTGTGGCATCTCCTCCAAATATTTACATGTTTTCTGCTTTTGACTCAATCATTTTCTAAAGATGATCGAAAGACTTACATCGTCTACATGGGCGATTATCCGAAGGGTGTGGGATTCGCAGAATCACTTCACACTAGTATGGTTGAGAGTGTCCTCGGCAGAAATTTTCCACCAGATGCTTTGCTGCATAGCTACAAGAGTTTGAATGGATTTGTGGCGAGGCTAACAAAAGAAGAAGCAAACAGAATGAGAGGAATGGATAGTGTGGTCTCTGTTATACCAGACAGAATCCATAAGCCACAAACAACAAGGTCTTGGGACTTTCTTGGCTTCCCCGAAAATGTTCAAAGAAACATTATAGCAGAGAGCAACACAATCGTTGGAGTGATCGATAGCGGAATTTGGCCTGAATCTGATAGCTTTAATGATGCTGGATTTGGTCCACCACCAAAGAAATGGAAGGGCATTTGCCAGAACTTCACTTGCAATAACAAAATAATTGGAGCACAATATTTTCGCACTAAGGGTTTTTTTGAGAAAGATGACATCAAGTCTCCAATTGATACAACTGGTCATGGGAGTCATTGTGCTTCCACTGCTGCGGGAAACCCAGTTAGGTCCGCGAGTCTATTAGGGTTTGGCTCAGGGACAGCCAGAGGAGGAGTTCCATCAGCACGTATTGCTGTGTATAAAGTGTGTTGGGCAACGGGTTGTGACACTACAGACATCCTTAAAGCCTATGATGCAGCCATTGCAGATGGTGTTGACATCCTTTCCGTCTCAGTGGGAGCTACACAGCTTACACACAACAAGTATTTTAAAGACGTACACGCAATAGGAGCTTTCCATGCAATGAAGAAAGGCATATTAACATCAACATCTGCGGACAATTTGGGTCAATTAGGTCCTTACTCAACCTCAAAGTTTGCACCTTGGTTGCTTAGTGTAGCTGCCTCCACCATAGATAAAAAGTTTTTCACTAAGATCCAGTTGGGAAATGGCAAGATCTATGAGGGAGTTTCAGTAAATGCATTTGATCTCCACAATATACAGCATCCATTAATTTATGCTGGAGATGCATCCATCATCAAGGGTAACAGTTCCAATGCTAGGTATTGCCAAGAAAACGCTTTGGATAAAGCTTTGGTGAAGGGAAAAATCCTTTTGTGTGATAACATTCCTTATCCATCATTTGTGGGATTTGCTCAAGGGGCTGTTGGTGTTATAATTAGAAGTAATGTTTCTTTAGCTGTGTCAGATGTATTTCCCCTGCCAGCGGCTCACATTACTCACAATGACGGGGCACAAATATATTCTTATTTAAAGTCAACAAGTAATCCAACAGCGACTATATTTAAGAGTTATGAAGGCAAAGATCCATTAGCCCCATATATTGATTCATTCTCAGGTAGAGGTCCAAACAAAATCACTCCAAATATTCTAAAGCCTGATTTAGCTGCTCCAGGGGTTAACATTCTAGCTGCATGGTCTCCAATTGCTCCTATCTCCGGAGTTAAAGGAGATAAGAGAATTTCAAAATACAATATACTATATGGAACTTCAATGGCATGTCCTCATGTTACTGCAGCAGCTGTTTACATCAAATCATTTCATCCCAACTGGTCTCCTGCAGTGATTAAATCCGCATTAATGACAACTGCTACTCCAATGCGTGATATACTTAATCATGGAAATGCTGAATTTGGTTATGGTGCTGGGCAAATCAATCCTATGAAGGCAGTAAAACCTGGATTAGTTTACGATGCTACTGAAATTGATTATGTCAAGTTTCTGTGTGGAGATGGTTATAGTGGATTTATGGACAAAATTACAGGAGATAATAAAACCACTTGTACACCAGCAAATACAGGAAGTGTTTTGGACCTTAATCTCCCATCTTTTGCTCTATCCACAACTCGCTCAAAGTATATTAGTGCCACTTTTAGTAGAACTGTTACTAATGTTGGATCAGCTAAATCCATATATAAAGCCACAGTAACTACACCTCCATCATCTTCTTCCTTAAACATCAAAGTAGTGCCAGATGTTTTGGTCTTCTCGTCTTTGGAGGAGAAGATGTCGTTCACCCTTAAGATTGAAGGAAGCATTAACAATGCAAATATAGTTTCTTCGTCTTTGGTTTGGGATGATGGCACTTTTCAAGTAAGGAGCCCCGTCGTTGTTTATGTTCCTCCGTAA 2214 0.4065 MISVGLWHLLQIFTCFLLLTQSFSKDDRKTYIVYMGDYPKGVGFAESLHTSMVESVLGRNFPPDALLHSYKSLNGFVARLTKEEANRMRGMDSVVSVIPDRIHKPQTTRSWDFLGFPENVQRNIIAESNTIVGVIDSGIWPESDSFNDAGFGPPPKKWKGICQNFTCNNKIIGAQYFRTKGFFEKDDIKSPIDTTGHGSHCASTAAGNPVRSASLLGFGSGTARGGVPSARIAVYKVCWATGCDTTDILKAYDAAIADGVDILSVSVGATQLTHNKYFKDVHAIGAFHAMKKGILTSTSADNLGQLGPYSTSKFAPWLLSVAASTIDKKFFTKIQLGNGKIYEGVSVNAFDLHNIQHPLIYAGDASIIKGNSSNARYCQENALDKALVKGKILLCDNIPYPSFVGFAQGAVGVIIRSNVSLAVSDVFPLPAAHITHNDGAQIYSYLKSTSNPTATIFKSYEGKDPLAPYIDSFSGRGPNKITPNILKPDLAAPGVNILAAWSPIAPISGVKGDKRISKYNILYGTSMACPHVTAAAVYIKSFHPNWSPAVIKSALMTTATPMRDILNHGNAEFGYGAGQINPMKAVKPGLVYDATEIDYVKFLCGDGYSGFMDKITGDNKTTCTPANTGSVLDLNLPSFALSTTRSKYISATFSRTVTNVGSAKSIYKATVTTPPSSSSLNIKVVPDVLVFSSLEEKMSFTLKIEGSINNANIVSSSLVWDDGTFQVRSPVVVYVPP* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0552 737 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Gso14g0552 737 Gene3D - 327 463 - -
Gso14g0552 737 Pfam PA domain 358 442 IPR003137 -
Gso14g0552 737 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Gso14g0552 737 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Gso14g0552 737 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Gso14g0552 737 PANTHER PUTATIVE-RELATED 19 734 - -
Gso14g0552 737 CDD PA_subtilisin_like 334 456 - -
Gso14g0552 737 Pfam Subtilase family 128 576 IPR000209 GO:0006508|GO:0008236
Gso14g0552 737 ProSiteProfiles Serine proteases, subtilase domain profile. 110 586 - -
Gso14g0552 737 SUPERFAMILY Subtilisin-like 105 590 IPR036852 GO:0004252|GO:0006508
Gso14g0552 737 CDD Peptidases_S8_3 103 560 IPR034197 -
Gso14g0552 737 Gene3D Peptidase S8/S53 domain 130 599 IPR036852 GO:0004252|GO:0006508
Gso14g0552 737 Pfam Peptidase inhibitor I9 30 102 IPR010259 -
Gso14g0552 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Gso14g0552 737 Gene3D - 603 735 - -
Gso14g0552 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 105 IPR037045 -
Gso14g0552 737 Pfam Fibronectin type-III domain 633 733 IPR041469 -
Gso14g0552 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 734 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0552 Gso-Chr14 5283079 5292937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0552 12 734 Subtilisin-like Serine Gene Family AT3G46850 48.118 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0552 - - gmx:100793805 1488.4