Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0529 ATGGAATTGGAAACCATCTACCCTCCTTGTTTTATGCCAAATTCAAATTGGTTTGTGCAAGAGAGCCACAGCACAGAGTGGACTAGAGAAGATAACAAGAAGTTTGAAAGTGCCCTTGCTATATATGACAACGACACCCCAGATAGATGGTTCAAGGTGGCAGCTATGATCCCTGGGAAGACTGTGTTTGATGTGATCAAGCAGTATAGGGAACTGGAAGAAGATGTGAGTGAAATCGAAGCCGGGCGTGTTCCAATTCCTGGCTATCTTGCCTCTTCTTTCACCTTTGAGCTGGTTGACAACCACAACTATGATGGATGCAGAAGAAGGCTTGCACCTGTCAGAGGCTCTGATCAAGAGAGAAAGAAAGGAGTCCCATGGACTGAAGATGAACACAGACGTTTTCTGATGGGACTTTTAAAGTATGGTAAAGGAGACTGGAGAAATATCTCTCGCAATTTTGTGGTCACTAAGACTCCGACACAAGTTGCTAGCCATGCACAAAAGTACTACATAAGGCAAAAGGTTTCTGGAGGGAAAGATAAAAGGAGACCAAGCATTCATGATATAACCACTGTTAATCTTACAGAAACTTCTGCATCAGATAAGAACAAGCCTCAGTTATTTAATGCGTCTCCTGTGCTTGCACCACAGCAGAAGCTGAATAGCATATCAAAGGTACAGCTGGGCTGGACTAGTAGCCACTACAATGATGGATCATTCATGGTTTTCAACCCAAATAGTGATGCCTTGTTTGTGTCATCTTCACCTGATGTCACTTCTATGGCCCTGAAAATGCAAGGGCAAGATCTCTATGACTGTGCTTTACATGAGGCTTATGCCAAGGTAAAAGTTCCAGGTTTCAGCATGGCTCCTAGAGACTTCAATAATGAAGCTGTTTTTGGTATTCATGCACTGTAA 921 0.4311 MELETIYPPCFMPNSNWFVQESHSTEWTREDNKKFESALAIYDNDTPDRWFKVAAMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASSFTFELVDNHNYDGCRRRLAPVRGSDQERKKGVPWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLTETSASDKNKPQLFNASPVLAPQQKLNSISKVQLGWTSSHYNDGSFMVFNPNSDALFVSSSPDVTSMALKMQGQDLYDCALHEAYAKVKVPGFSMAPRDFNNEAVFGIHAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0529 306 Gene3D - 19 86 - -
Gso14g0529 306 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 287 IPR043363 -
Gso14g0529 306 CDD SANT 126 170 IPR001005 -
Gso14g0529 306 Pfam Myb-like DNA-binding domain 126 170 IPR001005 -
Gso14g0529 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Gso14g0529 306 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 287 - -
Gso14g0529 306 Gene3D - 125 176 - -
Gso14g0529 306 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Gso14g0529 306 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Gso14g0529 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Gso14g0529 306 SUPERFAMILY Homeodomain-like 25 79 IPR009057 -
Gso14g0529 306 CDD SANT 26 72 IPR001005 -
Gso14g0529 306 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Gso14g0529 306 SMART sant 123 173 IPR001005 -
Gso14g0529 306 SMART sant 23 75 IPR001005 -
Gso14g0529 306 ProSiteProfiles SANT domain profile. 22 77 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0529 Gso-Chr14 5079370 5081714 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso14g0529 Myb_DNA-binding 4.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0529 - - gmx:778039 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0529 14 5079370 5081714 Gso2g2163 2 46277471 46279794 GST
Gso18g0270 18 2393787 2396233 Gso14g0529 14 5079370 5081714 PCT
Gso13g1349 13 28962335 28964823 Gso14g0529 14 5079370 5081714 PCT
Gso14g0529 14 5079370 5081714 Gso18g0270 18 2393787 2396233 PCT
Gso14g0529 14 5079370 5081714 Gso13g1349 13 28962335 28964823 PCT