Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0523 ATGGAAGCTCCGAGCATGGCGGCGACGGAGCGCACGGTGTTGCAGTTCTCTTCTTCGCAGAGCCTCTCGACGAAAGTTCACCCTCTCGTTGTCTTCAACATCTGCGATTGCTACGTCCGTCGTCTCGACCAAGCGGAGCGCGTCATCGGAACGCTACTCGGCTCCATTCTCCCCGACGGAACCGTCGATGTCCGCAATTCTTACGCCGTTCCGCACAGCGAGTCCGTCGACCAGGTCGCTTTGGATATTGAGTATCACCATAGTATGTTATTATCCCACCAGAAGGTGAACCCAAAGGAAGTTATAGTTGGGTGGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAATTTTATTCTCGAGAAGTACCCAATCCTATCCATTTGACCGTTGACACAGGATTCACAAAGGGAGCAGGCACCATAAAAGCATATGTTTCACACAATTTATCTCTTGGAGATCATCAAATTGCTGCACAGTTTCAAGAAATTCCTTTAGATCTTCGTATGGTTGAAGCTGAGCGCATTGGATTTGATACTCTGAAGGCAACTGCTGTCGACAAAATCCCCTCTGATTTAGAAGGGATGGAAGCATTAATGGGACATCTATTGGCCTTGATCGATGACATTTACAAATATGTTGATGATGTTGTGGAAGGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGCTGTAGGCTCCATTCCCAAATTGCCCTCATCAGCTTTTGAGAAGCTTGTGAATGACAGCTTGCAGGACCACTTGCTCTTGCTATATTTATCAAGCATCACTAGGACACAGCTTAGCCTGGCAGAAAAGTTGAATACGGCTGCTCAGATTTTGTGA 870 0.4632 MEAPSMAATERTVLQFSSSQSLSTKVHPLVVFNICDCYVRRLDQAERVIGTLLGSILPDGTVDVRNSYAVPHSESVDQVALDIEYHHSMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTKGAGTIKAYVSHNLSLGDHQIAAQFQEIPLDLRMVEAERIGFDTLKATAVDKIPSDLEGMEALMGHLLALIDDIYKYVDDVVEGRIDPDNKIGRFISDAVGSIPKLPSSAFEKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0523 289 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 18 288 - -
Gso14g0523 289 CDD MPN_eIF3f 25 282 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gso14g0523 289 Gene3D Cytidine Deaminase, domain 2 11 190 - -
Gso14g0523 289 SMART pad1_6 23 154 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gso14g0523 289 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F 18 288 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gso14g0523 289 Pfam Maintenance of mitochondrial structure and function 176 282 IPR024969 -
Gso14g0523 289 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 22 285 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gso14g0523 289 ProSiteProfiles MPN domain profile. 24 155 IPR037518 -
Gso14g0523 289 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 22 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0523 Gso-Chr14 5003332 5007087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0523 6 289 Eukaryotic Initiation Factors Gene Family AT2G39990 74.403 1.10e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0523 K03249 - gmx:100786716 533.872