Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0518 ATGGCACCGAAGCAGACCAAGGCTGAGAAGAAGATCGCTTACGATGCGAAGCTGTGCGACCTAATGGAGGAGTACGGCCAGATCCTCGTTGTGAACTCCGATAACGTGGGATCGAACCAGCTCCAGAACATTCGCAAGGGTCTCCGTGGCGACTCCGTCGTCCTCATGGGGAAGAACACCATGATGAAGCGCTCAGTCAGGATGCACGCTGAGAAAACCGGAAACAACGCCTATCTCAACCTTATCCCGCTCCTTGTTGGCAATGTGGGATTGATTTTCACCAAAGGTGACCTGAAGGAGGTCAGTGAGGAGGTTGCCAAGTACAAGGTTGGAGCTCCTGCTCGTGTTGGTTTGGTTGCCCCAATTGATGTTGTTGTTCCTCCTGGCAACACAGGGCTCGATCCCTCCCAGACCTCTTTCTTCCAGGTGCTCAACATTCCTACCAAGATTAACAAGGGTACTGTTGAAATCATTACCCCTGTGGAGCTCATTAAGAAGGGAGACAAGGTTGGATCTTCTGAAGCTGCATTGCTTGCCAAGCTAGGGATAAGGCCCTTCTCGTATGGGCTTGTGGTTCTTTCTGTTTATGATAATGGTTCAGTGTTCAGCCCTGAGGTTCTTGATCTTACTGAGGATGACCTTATTGAGAAGTTTGCTGCTGGTGTCTCAATGGTTACTTCACTTTCATTAGCTATCTCATACCCAACACTTGCTGCTGCACCACACATGTTTGTCAATGCCTACAAGAATGTTCTTGCTGTTGCGGTTGAGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGGATCCAAGTAAATTTGCTGTCGCTGCTGTTGCGGCTCCTGCTGCTGAGTCTGGTGCTCCTGCTGCAGCCAAGGAAGAGGAAAAGAAGGAAGAACCAGCTGAAGAATCTGATGATGACATGGGTTTCAGTCTGTTTGACTAA 960 0.4906 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAESGAPAAAKEEEKKEEPAEESDDDMGFSLFD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0518 319 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Gso14g0518 319 PIRSF L10E 1 319 IPR030670 GO:0042254
Gso14g0518 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 319 - -
Gso14g0518 319 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Gso14g0518 319 Pfam Ribosomal protein L10 7 108 IPR001790 -
Gso14g0518 319 Gene3D - 6 209 IPR043141 -
Gso14g0518 319 CDD Ribosomal_P0_L10e 9 185 - -
Gso14g0518 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 319 - -
Gso14g0518 319 MobiDBLite consensus disorder prediction 288 319 - -
Gso14g0518 319 Pfam 60s Acidic ribosomal protein 234 318 - -
Gso14g0518 319 MobiDBLite consensus disorder prediction 304 319 - -
Gso14g0518 319 Gene3D - 114 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0518 Gso-Chr14 4956885 4959071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0518 1 318 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 82.704 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0518 K02941 - gmx:100777482 572.392