Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0517 ATGGCGGGGAAAGTGGCGAAGGCAGCTTATGATGCAAAGATGCTGAAGCTTCTGAAAGAGTACAGTCAGGTGCTGGTGGTTTCATCAGACAATGTGGGTTCCAACCAGCTTCAGGGCATACGGAGGGGACTTAATGCTGATTCGGTGGTGGTGATGGGAAAGAACTCCATGATGAAACGCTCTATCATCTTGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCATTAATTTTCACCAAAGGTGACTTGAGGGAAGTTAGCGAACAGATTGCCAAGTACAAGGTTGTTCAACCTATTCTCATGTGCCCCAAGTACACGTCATATGACACATACCAGAATTGTACTTATATGCAATCTGGACAGATACCTTTGGGCCTCACGTGTTGTAATCAGCAATCTTCGCAGGCTTCTGAGCCTTTTCTTGTATGCTCAAAATTCTTGCCACACCAACATTGTTTCTTGATGAGATCAAGACAGTTCTTGATGACGAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGTAACTTGTGA 564 0.4557 MAGKVAKAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQIPLGLTCCNQQSSQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPLLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0517 187 Gene3D - 3 129 IPR043141 -
Gso14g0517 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Gso14g0517 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Gso14g0517 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Gso14g0517 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0517 Gso-Chr14 4950933 4955676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0517 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 50.588 6.87e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0517 K02941 - mnt:21409050 159.073