Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0516 ATGGCTTCCTCATACCGTGACCGCACGTCGGAGTTCCGGTTATTATCGGAGACTCTGAAGAAGATCGGAAGTCCGGTGCAACCCGAGAATGCTCCTTCGACCTCTCATGGCGAGTCGTATTCGAGATCCGAATTCAACCGAAAGGCCTCGCGTATCGGGTTGGGGATCCACGAGACCTCGCAGAAGATCGCGAGGCTCACGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCCGCAGTGGAGATTCAGGAGCTGACTGTTCTGATCAAGAACGAGATCACGGCGCTCAACTCGGCTCTCTTCGATTTGCAAACCGTTCAGAACACGGATATGGCTGACGGCGGTTACTCGCAGGATACGATTGTGCATTCCACCGCGGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACCAAACACCTTCAAGATGTCTTAACTGCTAGGACAGAGAATATAAAGGCTCACGAGAACAGGAAGCAGATATTTTCCAAGAACGCATCAAGAGAGAATCCTTTGCAGCATCAGCCAAAGCCAACTACTGAGCCGCCACCTTGGTCAAATTCATCGAATGCATCTGAGAGTTTGCATCAAGAATTGGCATTACCGTCAAATGGAGCTCCTGTTGGCAATCAACTAAGACGAAGGTTGGCTGTGGACAGCACTCCATCCCAGCAAATGGAAATGTCTATGGTACAGCAGGTTGTGCCTCGGCATGACAACTATGCACAAAGTCGGGCAACTGCTCTGCACAATGTGGAATCTACTATCACTGAGCTTAGTGGGATTTTCTCACATTTAGCTACAATGGTTGCCCATCAAGGGGAGCTTGCTATCAGGATTGATGACAATATGGATGAGTCATCGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCGAATATCATCAAATAGGTGGCTTCTAATAAAGATATTTGTCATTCTGATACTTTTCCTCATGATCTTCATATTCTTTGTCGCCTAA 1002 0.48 MASSYRDRTSEFRLLSETLKKIGSPVQPENAPSTSHGESYSRSEFNRKASRIGLGIHETSQKIARLTQLARKSSMFNDPAVEIQELTVLIKNEITALNSALFDLQTVQNTDMADGGYSQDTIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHENRKQIFSKNASRENPLQHQPKPTTEPPPWSNSSNASESLHQELALPSNGAPVGNQLRRRLAVDSTPSQQMEMSMVQQVVPRHDNYAQSRATALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESSANVEGAHSSLLRHLNRISSNRWLLIKIFVILILFLMIFIFFVA* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0516 333 MobiDBLite consensus disorder prediction 157 198 - -
Gso14g0516 333 CDD SNARE_syntaxin5 244 329 - -
Gso14g0516 333 SUPERFAMILY t-snare proteins 41 296 IPR010989 GO:0016020|GO:0016192
Gso14g0516 333 ProSitePatterns Syntaxin / epimorphin family signature. 247 286 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gso14g0516 333 PANTHER SYNTAXIN 4 332 IPR045242 -
Gso14g0516 333 PANTHER SYNTAXIN-31 4 332 - -
Gso14g0516 333 MobiDBLite consensus disorder prediction 19 44 - -
Gso14g0516 333 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 241 303 IPR000727 -
Gso14g0516 333 SMART tSNARE_6 236 303 IPR000727 -
Gso14g0516 333 Pfam SNARE domain 278 329 IPR000727 -
Gso14g0516 333 Gene3D - 38 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0516 Gso-Chr14 4945514 4950875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0516 1 333 SNARE and Associated Proteins AT5G05760 65.579 8.15e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0516 K08490 - gmx:100777383 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0516 14 4945514 4950875 Gso2g2175 2 46415164 46419480 GST