Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0512 ATGATTTTAAGGATGCCGATATTAAAAAAAAAAAAAAGTCTACAAAAGAAAGATATTCTGTGCTCTTCCATCCCACATCCAGCTCTATGCAAAATAATGGCTCTAACTTTAGTCGTGTTTCTTCTCAGCCTTGTTTCACAAACCATGGTGTCCATGATGCCAGGTACACTGGGTCACGCTTTGAGTGCAGAGAGTGATAAGGTGGCTTTACTTGCTCTGAAGCAAAAGCTTACCAATGGAGTGTTTGATGCTCTTCCATCATGGAACGAGTCTTTGCATTTGTGTGAGTGGCAGGGTGTTACATGCGGCCACCGCCACATGAGAGTCACTGTATTGCGCTTGGAAAATCAAAACTGGGGTGGTACTCTTGGACCATCCTTGGCAAATCTAACCTTCCTCAGAAAGCTCATTCTTTCCAACATCGACTTGCATGCCCAAATTCCTACGCAAATTGGTCGACTAAAGATGCTGCAGGTTCTTGACTTGAGCCACAACAATCTCCATGGTCAGATTCCTATACAACTTACTAACTGCTCTAAACTTGAGGTAATTAACTTGTTGTACAATAAACTCACCGGAAAACTTCCCTCGTGGTTCGGAACTGGATCCATCACAAAGCTTAGGAAGTTGCTTCTCGGTGCCAATGATCTAGTTGGTACTATAACACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATTACACTTGCACGAAATCATTTGGAAGGAACTATACCTCATGCTTTGGGTCGGTTATCAAATTTGAAAGAGTTGAATCTTGGTTTAAATCATTTGTCGGGAGTAGTCCCTGATTCCCTTTACAACCTTTCCAATATTCAAATTTTTGTTCTCAGCGTAAACCAGTTATGTGGTACTCTTCCATCAAATATGCAACTTGCTTTTCCAAATCTTCGAGATTTCTTGGTTGGAGGTAACAACTTCAATGGAAGTTTCCCGTCTTCAATATCCAACATCACCGGATTGCACGTGTTTGATATCTCCTTAAATGGTTTTAGCGGATCAATTCCTCCCACTTTCGGAAGCTTAAACAAACTAACGAGGTTTCACATTGCTTATAATAGTTTTGGAAGTGGGAGAGCTCAGGATTTGGATTTCCTTTCCTCATTAACCAATTGTACTCAATTGCACAAACTTATTTTGGAGGGCAATCAATTTGGTGGTGTGTTGCCAGATCTTATTGGAAATTTTTCTGCCAATCTCACTTTGCTTGATATGGGAAAAAATCAAATATCTGGAATGATACCCGAAGGAATTGGAAAGCTAATCGGTTTAACTGAGTTCATTATGGTAGATAATTACCTAGAGGGAACTATTCCAGGTTCAATTGGAAAGCTTAAAAATCTAGTAAGATTCGCCCTGCAAGGAAACTATTTGTCTGGTAATATTCCTACCGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGCGCACAAATAATCTCGAAGGAAGCATTCCATTAAGCCTCAAATACTGCACCCGCATGCAGTCATTTGGTGTTGCTGACAACAACTTGAGTGGTGATATCCCTAATCAAACATTTGGCAATCTAGAAGGCTTGATAAATCTTGACTTGTCCAACAACTCTTTCAATGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTATATTTAAATGAAAACAAGTTGTCTGGTGAAATTCCCCCAGAACTTAGCACTTGTTCCATGTTAACAGAGCTCGTGCTGGAGAGAAACTACTTCCATGGAAGCATACCTTCGTTCTTGGGCTCTTTAAGATCCCTCGAAATCCTAGACCTTTCTAACAATGACTTGTCGAGCACAATCCCTGGTGAACTACAAAATCTGACTTTTTTGAATACTTTGAACTTGTCTTTTAACCATCTTTATGGTGAAGTTCCTATAGGAGGTGTCTTTAATAACTTAACAGTAGTTTCACTCATTGGAAATAAGGATCTCTGTGGGGGGATACCTCAACTGAAGCTCCCAACTTGCTCTAGGTTGCCGTCAAAGAAACACAAGTGGTCTATTAGAAAGAAACTCATCCTCATCATTGTAATTGAAGTTGGAGGGGTTTTGGTTAGTTTCATAGCATGTATCAGCATCTATTTGTTCAGAAAAAAGCCCAAAACATTATCATCTCCATTGTCTCTACAAAATGGGCGCGTGAAGGTTTCTTACGGAGAGCTGCATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGGACAGGATGCTGTGGTTCTGTATATAGAGGATCTCTTCTCCATTTCAAAGGACCAATTGCCGTGAAGGTGATGAATCTTGAAACAGGTGGGGCATCAAAGAGTTTCGCAGCTGAATGCAAGGCTCTAGGAAAGATCATGCACCGGAATCTTCTCACTGTCCTGACTTGTTGTTCAAGTATTGACTATAATGGGAAGGATTTCAAGGCTATTGTTTTTGAGTTCATGGCTAATGGGAGTCTAGAAAATTTGCTGCGTAGCAACGAAGAGCTCGAGTCTAGAAATTTCAATATCAACCTTCAACTTATGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATCATGGTTCTGAGCAGGCCGTAGTTCACTGTGATATTAAGCCAAGCAACATTCTTCTTGACGATGACTTTGTTGCCCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTAATGTGGTCACGGGACATTCCAGCAGAGATCAGGTTAGTTCGTCTGCAATTAAAGGAACCATTGGATATGTCCCCCCAGAGTACGGAGCAGGTGTGGGAGTATCACCAAAAGGAGATATCTACAGCTACGGAATCCTTCTGTTGGAGATGCTGACAGGAATGAGACCAACAGATAACAAGTTTGGTGAGAGTCTAAGCCTACACAAATTCTGTCAGATGGCAATTCCAGAAGGAATAACTGAGATAGTAGATTCACGTTTGCTTGTGCCAACAACTACTGAAGAGGGAACAAGGGTCAGGGTCATGGAAAGAAACATTAGGGAGTGTCTGGTGTCCTTTGCTAGGATTGGACTTGCATGTTCTGCAGAATTGCCCGTTCAGCGAATGAGCATAAAAGATGTGATAGTGGAATTGCACCTCATCAAAAAGAAGCTGGCTCGCTAG 3150 0.4111 MILRMPILKKKKSLQKKDILCSSIPHPALCKIMALTLVVFLLSLVSQTMVSMMPGTLGHALSAESDKVALLALKQKLTNGVFDALPSWNESLHLCEWQGVTCGHRHMRVTVLRLENQNWGGTLGPSLANLTFLRKLILSNIDLHAQIPTQIGRLKMLQVLDLSHNNLHGQIPIQLTNCSKLEVINLLYNKLTGKLPSWFGTGSITKLRKLLLGANDLVGTITPSLGNLSSLQNITLARNHLEGTIPHALGRLSNLKELNLGLNHLSGVVPDSLYNLSNIQIFVLSVNQLCGTLPSNMQLAFPNLRDFLVGGNNFNGSFPSSISNITGLHVFDISLNGFSGSIPPTFGSLNKLTRFHIAYNSFGSGRAQDLDFLSSLTNCTQLHKLILEGNQFGGVLPDLIGNFSANLTLLDMGKNQISGMIPEGIGKLIGLTEFIMVDNYLEGTIPGSIGKLKNLVRFALQGNYLSGNIPTAIGNLTMLSELYLRTNNLEGSIPLSLKYCTRMQSFGVADNNLSGDIPNQTFGNLEGLINLDLSNNSFNGSIPLEFGNLKHLSILYLNENKLSGEIPPELSTCSMLTELVLERNYFHGSIPSFLGSLRSLEILDLSNNDLSSTIPGELQNLTFLNTLNLSFNHLYGEVPIGGVFNNLTVVSLIGNKDLCGGIPQLKLPTCSRLPSKKHKWSIRKKLILIIVIEVGGVLVSFIACISIYLFRKKPKTLSSPLSLQNGRVKVSYGELHEATNGFSSSNLVGTGCCGSVYRGSLLHFKGPIAVKVMNLETGGASKSFAAECKALGKIMHRNLLTVLTCCSSIDYNGKDFKAIVFEFMANGSLENLLRSNEELESRNFNINLQLMLNIALDVANALDYLHHGSEQAVVHCDIKPSNILLDDDFVAHLGDFGLARLLNVVTGHSSRDQVSSSAIKGTIGYVPPEYGAGVGVSPKGDIYSYGILLLEMLTGMRPTDNKFGESLSLHKFCQMAIPEGITEIVDSRLLVPTTTEEGTRVRVMERNIRECLVSFARIGLACSAELPVQRMSIKDVIVELHLIKKKLAR* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0512 1049 PANTHER LRR RECEPTOR-LIKE KINASE 50 1049 - -
Gso14g0512 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 873 885 IPR008271 GO:0004672|GO:0006468
Gso14g0512 1049 Coils Coil 829 849 - -
Gso14g0512 1049 Gene3D Ribonuclease Inhibitor 369 679 IPR032675 -
Gso14g0512 1049 Gene3D Ribonuclease Inhibitor 302 368 IPR032675 -
Gso14g0512 1049 Gene3D Transferase(Phosphotransferase) domain 1 824 1049 - -
Gso14g0512 1049 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Gso14g0512 1049 Pfam Leucine rich repeat 230 289 IPR001611 GO:0005515
Gso14g0512 1049 Pfam Leucine rich repeat 576 634 IPR001611 GO:0005515
Gso14g0512 1049 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 50 1049 - -
Gso14g0512 1049 SMART LRR_typ_2 621 646 IPR003591 -
Gso14g0512 1049 SMART LRR_typ_2 597 620 IPR003591 -
Gso14g0512 1049 SMART LRR_typ_2 154 178 IPR003591 -
Gso14g0512 1049 SMART LRR_typ_2 549 573 IPR003591 -
Gso14g0512 1049 SMART LRR_typ_2 252 275 IPR003591 -
Gso14g0512 1049 Gene3D Phosphorylase Kinase; domain 1 723 823 - -
Gso14g0512 1049 SUPERFAMILY L domain-like 90 377 - -
Gso14g0512 1049 ProSiteProfiles Leucine-rich repeat profile. 599 622 IPR001611 GO:0005515
Gso14g0512 1049 SUPERFAMILY Protein kinase-like (PK-like) 716 1041 IPR011009 -
Gso14g0512 1049 PRINTS Leucine-rich repeat signature 157 170 - -
Gso14g0512 1049 PRINTS Leucine-rich repeat signature 597 610 - -
Gso14g0512 1049 SUPERFAMILY L domain-like 405 660 - -
Gso14g0512 1049 Gene3D Ribonuclease Inhibitor 62 202 IPR032675 -
Gso14g0512 1049 Gene3D Ribonuclease Inhibitor 203 300 IPR032675 -
Gso14g0512 1049 ProSiteProfiles Protein kinase domain profile. 742 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0512 1049 Pfam Leucine rich repeat N-terminal domain 64 102 IPR013210 -
Gso14g0512 1049 Pfam Protein kinase domain 744 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0512 1049 SMART serkin_6 742 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0512 Gso-Chr14 4910436 4914235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0512 59 1049 Receptor kinase-like Gene Family AT3G47570 43.844 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso14g0512 Pkinase 1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0512 - - gsj:114384365 2027.68