Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0511 ATGGCTCTAACTTTAGTCATGTTTCTTCTCAGCCTTGTTTCACAAACCATGGTGTCCATGATGCCAGGAACAGTTGGTCACGCTTTGAGTGCAGAGAGTGATAAGGTGGCTTTACTTGCTCTGAAGCAAAAGCTTACCAATGGAGTGTTTGATGCTCTTCCATCATGGAACGAGTCTTTGCATTTGTGTGAGTGGCAGGGTGTTACATGCGGCCACCGCCACATGAGAGTCACTGTATTGCGCTTGGAAAATCAAAACTGGGGTGGTACTCTTGGACCATCCTTGGCAAATCTAACCTTCCTCCGAAAGCTCATTCTTTCCAACATCGACTTGCATGCCCAAATTCCTACGCAAATTGGTCGACTAAAGATGCTGCAGGTTCTTGACTTGAGCCACAACAATCTCCATGGTCAGATTCCTATACAACTTACTAACTGCTCTAAACTTGAGGTAATTAACTTGTTGTACAATAAACTCACCGGAAAACTTCCCTCGTGGTTCGGAACTGGATCCATCACAAAGCTTAGGAAGTTGCTTCTCGGTGCCAATGATCTAGTTGGTACTATAACACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATTACACTTGCACGAAATCATTTGGAAGGAACTATACCTCATGCTTTGGGTCGGTTATCAAATTTGAAAGAGTTGAATCTTGGTTTAAATCATTTGTCGGGAGTAGTCCCTGATTCCCTTTACAACCTTTCCAATATTCAAATTTTTGTTCTCGCAAAAAACCAGTTATGTGGTACTCTTCCATCAAACATGCAACTTGCTTTTCCAAATCTTCGAGATTTCTTGGTTGGAGGTAACAACTTCAATGGAAGTTTCCCGTCTTCAATATCCAACATCACCGGATTGCACGTGTTTGATATCTCCTTAAATGGTTTTAGCGGATCAATTCCTCCCACTTTGGGAAGCTTAAACAAACTAACGAGGTTTCACATTGCTTATAATAGTTTTGGAAGTGGGAGAGCTCAGGATTTGGATTTCCTTTCCTCATTAACCAATTGTACTCAATTGCACAAACTTATTTTGGAGGGCAATCAATTTGGTGGTGTGTTGCCAGATCTTATTGGAAACTTTTCTGCCAATCTCACTTTGCTTGATATTGGAAAAAATCAAATATCTGGAATGATACCCGAAGGAATTGGAAAGCTAATCGGTTTAACTGAGTTCACTATGGTAGATAATTACCTAGAGGGAACTATTCCAGGTTCAATTGGAAAGCTTAAAAATCTAGTAAGATTCGCCCTGGAAGGAAACTATTTGTCTGGTAATATTCCTACCGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGCGCACAAATAATCTCGAAGGAAGCATTCCTTTAAGCCTTAAATACTGCACCCGCATGCAGTCAGTTGGTGTTGCTGACAACAACTTGAGTGGTGATATCCCTAATCAAACATTTGGCAATCTAGAAGGCTTGATAAATCTTGACTTGTCCAACAACTCTTTCACTGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTATATTTAAATGAAAACAAGTTGTCTGGTGAAATTCCCCCAGAACTTAGCACTTGTTCCATGTTAACAGAGCTCGTGCTGGAGAGAAACTACTTCCATGGAAGCATACCTTCGTTCTTGGGCTCTTTCAGATCCCTCGAAATCCTAGACCTTTCTAACAATGACTTCTCGAGCACAATCCCTGGTGAACTTCAAAATCTGACTCTTTTGAATACTTTGAACTTGTCTTTTAACCATCTTTATGGTGAAGTTCCTATAGGAGGTGTCTTTAATAACTTAACAGCAGTTTCACTCATTAGAAATAAGGATCTCTGTGGGGGGATACCTCAACTGAAGCTCCCAACTTGCTCTGGGTTGCCGTCAAAGAAACACAAGTGGTCTATTACAAAGAAACCCATTGTCATCATTGTAATTGGAGTTGGAGGGGGTTTGGTCAGTTTCATAATATTCATCAGCATCTATTTGTTCTGGAAAAAGCCCAAAATATTTTTTTCTTCATCACAGTCTCTGCAAAATATGTACTTGAAGGTTTCTTATGCAGAGCTGCATGAAGCTACCAAAGGATTTTCTTCATCCAATTTAGTAGGTACCGGAAGCTTTGGTTCTGTGTATAAAGGATCTCTTCTCCATTTTGAAAGTCTTGTTGCTGTAAAGGTGTTGAACCTTGAAACTTTTGGGGCATCAAAGAGTTTCGCAGCTGAATGCAAGGCTCTAGGAAAGATCATGCACAATAATGTTCTCAAGATCCTGACATTTTGTTCAAGTGTTGATTATAATGGGGATGATTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGGAGTCTAGATAGTTTGCTGCACGGCAATGAAGAGCTCGAGTCTGGAAATTTCAATCTCAACCTTCAACTTTTGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGAATATCTTCATCATGTTTCTGAGCAAGCTGTAGTCCACTGTGATATTAAGCCAAGCAACATTCTTCTTGATGATGACTTTGTTGCTCACTTGGGTGATTTTGGGTTAGCGAGGCTCTTTCATGTGCTCACGGAACATTCCAGCAGAGATCAGATTAGTTCGTCTGCAATTAAAGGAACCATTGGATATGTTCCCCCTGAATACGGAGCAGGTGTACGAGTATCACCAAAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTGACGGGAATGAGACCAACAGATAACATGTTTGGTGAGGGTCTTAGCCTACACAAATTCTGTCAGATGGCAATTCCAGAAGAAATAACTGAGATAGTAGATTCACGTTTGCTTGTGCCAATTAATAAAGAAGGAACAAGGGTCATTGAAACCAACATCAGGGAGTGTCTGGTGGCCTTTGCTAGGATTGGAGTTTCATGTTCTGCAGAATTGCCCGTTCCGCGAATGGACATAAAAGATGTGATAATGGAGTTGGAAGCAATCAAACAGAAGCTTCCCCAGTAG 3048 0.4072 MALTLVMFLLSLVSQTMVSMMPGTVGHALSAESDKVALLALKQKLTNGVFDALPSWNESLHLCEWQGVTCGHRHMRVTVLRLENQNWGGTLGPSLANLTFLRKLILSNIDLHAQIPTQIGRLKMLQVLDLSHNNLHGQIPIQLTNCSKLEVINLLYNKLTGKLPSWFGTGSITKLRKLLLGANDLVGTITPSLGNLSSLQNITLARNHLEGTIPHALGRLSNLKELNLGLNHLSGVVPDSLYNLSNIQIFVLAKNQLCGTLPSNMQLAFPNLRDFLVGGNNFNGSFPSSISNITGLHVFDISLNGFSGSIPPTLGSLNKLTRFHIAYNSFGSGRAQDLDFLSSLTNCTQLHKLILEGNQFGGVLPDLIGNFSANLTLLDIGKNQISGMIPEGIGKLIGLTEFTMVDNYLEGTIPGSIGKLKNLVRFALEGNYLSGNIPTAIGNLTMLSELYLRTNNLEGSIPLSLKYCTRMQSVGVADNNLSGDIPNQTFGNLEGLINLDLSNNSFTGSIPLEFGNLKHLSILYLNENKLSGEIPPELSTCSMLTELVLERNYFHGSIPSFLGSFRSLEILDLSNNDFSSTIPGELQNLTLLNTLNLSFNHLYGEVPIGGVFNNLTAVSLIRNKDLCGGIPQLKLPTCSGLPSKKHKWSITKKPIVIIVIGVGGGLVSFIIFISIYLFWKKPKIFFSSSQSLQNMYLKVSYAELHEATKGFSSSNLVGTGSFGSVYKGSLLHFESLVAVKVLNLETFGASKSFAAECKALGKIMHNNVLKILTFCSSVDYNGDDFKAIVFEFMPNGSLDSLLHGNEELESGNFNLNLQLLLNIALDVANALEYLHHVSEQAVVHCDIKPSNILLDDDFVAHLGDFGLARLFHVLTEHSSRDQISSSAIKGTIGYVPPEYGAGVRVSPKGDIYSYGILLLEMLTGMRPTDNMFGEGLSLHKFCQMAIPEEITEIVDSRLLVPINKEGTRVIETNIRECLVAFARIGVSCSAELPVPRMDIKDVIMELEAIKQKLPQ* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0511 1015 SMART serkin_6 711 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0511 1015 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 1014 - -
Gso14g0511 1015 Pfam Protein kinase domain 713 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0511 1015 Pfam Leucine rich repeat 471 530 IPR001611 GO:0005515
Gso14g0511 1015 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Gso14g0511 1015 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Gso14g0511 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Gso14g0511 1015 Gene3D Ribonuclease Inhibitor 30 169 IPR032675 -
Gso14g0511 1015 Gene3D Ribonuclease Inhibitor 170 268 IPR032675 -
Gso14g0511 1015 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Gso14g0511 1015 ProSiteProfiles Protein kinase domain profile. 711 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0511 1015 SUPERFAMILY Protein kinase-like (PK-like) 690 1007 IPR011009 -
Gso14g0511 1015 Coils Coil 999 1015 - -
Gso14g0511 1015 Gene3D Phosphorylase Kinase; domain 1 679 792 - -
Gso14g0511 1015 Gene3D Transferase(Phosphotransferase) domain 1 793 1014 - -
Gso14g0511 1015 ProSiteProfiles Leucine-rich repeat profile. 567 590 IPR001611 GO:0005515
Gso14g0511 1015 SMART LRR_typ_2 589 614 IPR003591 -
Gso14g0511 1015 SMART LRR_typ_2 122 146 IPR003591 -
Gso14g0511 1015 SMART LRR_typ_2 493 516 IPR003591 -
Gso14g0511 1015 SMART LRR_typ_2 565 588 IPR003591 -
Gso14g0511 1015 SMART LRR_typ_2 517 541 IPR003591 -
Gso14g0511 1015 SMART LRR_typ_2 220 243 IPR003591 -
Gso14g0511 1015 Gene3D Ribonuclease Inhibitor 338 647 IPR032675 -
Gso14g0511 1015 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Gso14g0511 1015 PANTHER LRR RECEPTOR-LIKE KINASE 18 1014 - -
Gso14g0511 1015 Gene3D Ribonuclease Inhibitor 269 337 IPR032675 -
Gso14g0511 1015 SUPERFAMILY L domain-like 373 628 - -
Gso14g0511 1015 SUPERFAMILY RNI-like 80 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0511 Gso-Chr14 4900305 4904330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0511 27 1013 Receptor kinase-like Gene Family AT3G47570 43.731 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso14g0511 Pkinase 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0511 - - gmx:100776429 1907.11