Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0501 ATGAAGAAGAATAAATCACCCTTCTCCGCCGCCACCTTCACTCTCTTCATCGCCACCCTCTTAATCCTCTCTTCACTATCACCATCGCATGCCCTCGGTTCCGCCGCCACCCTCGCCGTCACCTCCTCCGCCGTCTGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCGTGCTACCGCCACGGCGAAGTCGTCGCCGTCGCCCCCAACGTCTCCTTCTCGACCATCTCCGGCGGCCGGAGCTACTTCTGCGGTCTCCGCTGCGGCAACTACAGCCTCCTCTGCTGGGACACCCTCTCCGCCTTCCAAAGCAAGAGGCTTTACAACAATGGCACTGTTCTATTCGAGAATCTCGCCCTCGGAGACTCCCAGGTTTGCGCCACCGTGGTCGGCGCCGGAAAGGCGTCGTGCTGGAGAACGAACGCCGCGTTCGAATCGCCATCTGGCTCGGACCGGTTTGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAGTTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGTGTTGGGTCTATAGCGAGAAAAATGGAGAGTGAATTTAGGAACATGTCTATGGTGAGTCTTGTGGCTGGGGAGTCACATGTTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGCAGAGGAAGTAACAACTTTGGTCAAATTGATGTTCCTGAAGGAGGTGCTTTGGAGTTTTCTGGTTTGGCGCTTGGGGTTGAGCACACTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGATAATGTTACAAAAGGTGTTTCTTTTGAGGTTATTGTTTCTGGGTCCAATTTTACTTGTGGATTGACTACTAACAATTTTTCAGTCATTTGTTGGGGTCCTGGTTGGGATAATGGTTCAGGTTATGAGATTCCCTTGCCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTCCTTGTAGTGAATGTGGGATATATCCTCAATCTGCGTCTCTGTGTTCAGGCTATGGAAACATTTGTAAGCCAAAGCCTTGTTTACCTGAAATGCTGGTGCCAGCGCCACCTGTGGTGATGCCGGCAACACCACCGAGTCCTCCTCCGGCTTCTCGGTCGAAGGCCTTGACTAAGGGGTTATTGGCATTTGCCATTGTTGGATGTGTGGGAGGTGTTGCTGGGATATGCACTGCGATTTATTGTTTGTGGACTGGGGTTTGTTTTGGGAAGAAGAAAGTTCACAATTCTGTGCAGCCAACAATCACTAGAGGTGGCAGTGTAAATGGTGTGGGCGGTTCTAATAACAGTATTAGTCCTCCTTCTAGATCATCCACCATAAGGCGTCAAGGGTCGCGGATAATGAGGCGTCAAAGGAGTGGAACATCATCCACAAAGCATCCTGAGAGGGCTGAGGAGTTCACTTTGGCTGAACTTGTTGCAGCCACCGACAATTTTTCCCTTGAGAATAAGATTGGTGCTGGAAGCTATGGTGTTGTTTATAAAGGCAAACTCGCCGATGGTCGCGAGGTGGCAATCAAAAGGGGTGAAACTAGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGACTGCATTTGAGTCAGAATTGGCCTTCTTGTCCCGGTTACACCACAAGCACTTGGTCAGGTTGGTGGGGTTCTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTACGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAGAACAATGTGGACAAGAGTAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAGTAGCGCTGGATGCTTCACGAGGAATTGAGTATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAACATTCTCATTGATGCGACTTGGACGGCGAGAGTATCGGATTTTGGATTGTCATTGATGAGTCCAGAATCTGACCATGATTACCAGCCGATGAAGGCAGCGGGAACAGTTGGATACATTGATCCTGAATATTATGGTCTGAATGTATTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTGCTGCTAGAACTATTAACAGGAAAGAGGGCTATATTCAAAAATGATGAAAATGGAGGCACCCCAGTGAGTGTTGTAGACTTCGCAGTGCCGGTAATTATGACGGGAGAATTGGCGAAAATTTTGGACCCCAGGGTTAAACCACCAGAGATGAATGAAACAGAAGCAGTGGAGCTAGTGGGATATACTGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTAGCAAATTTGGAGCGTGCTTTGGCTCTCTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAATCTCCATTGTATCCGACTGA 2391 0.4868 MKKNKSPFSAATFTLFIATLLILSSLSPSHALGSAATLAVTSSAVCGVVASEPTRRIACYRHGEVVAVAPNVSFSTISGGRSYFCGLRCGNYSLLCWDTLSAFQSKRLYNNGTVLFENLALGDSQVCATVVGAGKASCWRTNAAFESPSGSDRFDSISSGSGFSCGVLKGSDRVRCWGVGSIARKMESEFRNMSMVSLVAGESHVCGLNSSGYLVCRGSNNFGQIDVPEGGALEFSGLALGVEHTCAIRRSNGSVVCWGGRGLFEDNVTKGVSFEVIVSGSNFTCGLTTNNFSVICWGPGWDNGSGYEIPLPPILPGPCVQSPCSECGIYPQSASLCSGYGNICKPKPCLPEMLVPAPPVVMPATPPSPPPASRSKALTKGLLAFAIVGCVGGVAGICTAIYCLWTGVCFGKKKVHNSVQPTITRGGSVNGVGGSNNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTLAELVAATDNFSLENKIGAGSYGVVYKGKLADGREVAIKRGETSTKMKKFQEKETAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKVALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDHDYQPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSVVDFAVPVIMTGELAKILDPRVKPPEMNETEAVELVGYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIVSD* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0501 796 Pfam Protein kinase domain 488 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0501 796 SMART serkin_6 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0501 796 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Gso14g0501 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Gso14g0501 796 SUPERFAMILY RCC1/BLIP-II 66 300 IPR009091 -
Gso14g0501 796 MobiDBLite consensus disorder prediction 422 450 - -
Gso14g0501 796 ProSiteProfiles Protein kinase domain profile. 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0501 796 Gene3D Phosphorylase Kinase; domain 1 448 567 - -
Gso14g0501 796 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 3 794 IPR044815 GO:0004674
Gso14g0501 796 Gene3D Transferase(Phosphotransferase) domain 1 568 785 - -
Gso14g0501 796 SUPERFAMILY Protein kinase-like (PK-like) 465 772 IPR011009 -
Gso14g0501 796 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 3 794 - -
Gso14g0501 796 Gene3D - 146 340 IPR009091 -
Gso14g0501 796 MobiDBLite consensus disorder prediction 422 471 - -
Gso14g0501 796 Pfam Regulator of chromosome condensation (RCC1) repeat 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0501 Gso-Chr14 4807988 4810785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0501 9 796 Receptor kinase-like Gene Family AT3G55950 60.122 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso14g0501 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0501 - - gmx:100798905 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0501 14 4807988 4810785 Gso2g2188 2 46552331 46555084 GST
Gso18g0238 18 2073801 2075174 Gso14g0501 14 4807988 4810785 PCT
Gso13g1384 13 29339317 29340818 Gso14g0501 14 4807988 4810785 PCT
Gso14g0501 14 4807988 4810785 Gso18g0238 18 2073801 2075174 PCT
Gso14g0501 14 4807988 4810785 Gso13g1384 13 29339317 29340818 PCT