Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0499 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTCTGCGCAAGAATGGCTTGTCGGAAGCTGAGTCCGCTCTCCGACAAGACATCATCGAGAACAACGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCACCGCCGCCGCCGGTCAGAGTCCGATCCTTCTCCCGGCTATCCGAGCTCTCCGCCGACGGCAACTGCTCCAAATCCAGCTCCGATGAGTTCGTCAGCATCGGTTCTCCCACTTCTCGTGTTTCTTCTTCAGAATTCATAAATCCGTATGGAATTCGTTCCTCGTCTCAGACTCAGAATGACTCCGCATCTTCGTCTGAAAGATTATCTCAGTTTGGCACTGCACGTGATTATCATGATTTTGAAATGCAGAATGAACCATATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGATTTCTTTGCGTGTCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGAAAATCAGCATGACAATTCTCTGGACCTTGTTTACAACTCTGAAGAATTTCTATTAAAGGGAAATGGTAATGGTGGTTACATGGACAAGGCATGCCTTTATAATCATTCCTCTGTAAGGGATGGAAATGTTACTTATTCAAAAGAGTATTGTCATGTTGATAACAACAACTTATTTGAAGGGGAATTAGAGGGCAAGGCTGAGAAACACACTGTTGCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTGGTTCTTGCAGTTTGGATCCTACAAACTTCGGATACCCTAATTTGAAGGAAATCCATCTGAATGGTTTTCATTTGAAGGTTGTTGGGGACATTAACTCTTTTGGCTCTACTTCAGAGCTAACTGTGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAGTAAGGAGTACAACGGTCCATATGACTTAACTATCAAAGTTAATCAAAAAGATCTACCAAATGGACTTGACACCTATAAAGCTCGAGATGGTGGAGAATTAGCTGAAGAGTGCCAAGATCCTGAGATTACTGCAGATGGAGAGGATACTACTGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAATAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATCATTAAAAACGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAGCAGATCTACACCACTTTTTGCGCCTTTATGATTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCAAGCAAACTTGTACGAATTTCAGAAGTTCAAGCAAGAATCTGGAGGGGAAGAATATTTTACGTTGAAGAGATTGCAGCTCATTACTCGCCAATGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAGAACATTCTAATCAAAAGTTACAGAAGATGTGAGATAAAGGTTATTGATCTAGGAAGCAGTTGCTTCCAAACAGACAATTTGTGTCTATATGTACAATCCCGATCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGCTGTATCTTGGCAGAGTTATGCTCTGGTGAAGTGCTATTTCCAAATGATGCAGTTGTGATGATTCTAGCACGCATGATTGGAATGTTTGGTTCTATTGATATGGAGATGTTGGTAAAAGGGCAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTACGTAAATGAGGAGACTGATCAACTGGAGTACATAATTCCAGAAGAGTCATCATTGGAGCAGCACCTACAGGTCACTGATACTACGTTTATCGACTTTGTCAGATACTTACTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAAGCACTGAGGCATCCATGGCTTTCCTATGTTTACTAG 2151 0.4091 MAVSNGVEAVLEFLRKNGLSEAESALRQDIIENNDLGNFDYEKFFFPMVPPPPPVRVRSFSRLSELSADGNCSKSSSDEFVSIGSPTSRVSSSEFINPYGIRSSSQTQNDSASSSERLSQFGTARDYHDFEMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAETENQHDNSLDLVYNSEEFLLKGNGNGGYMDKACLYNHSSVRDGNVTYSKEYCHVDNNNLFEGELEGKAEKHTVACSCEVPFCKSSPGGSCSLDPTNFGYPNLKEIHLNGFHLKVVGDINSFGSTSELTVNQSFDYYTKNDSSKEYNGPYDLTIKVNQKDLPNGLDTYKARDGGELAEECQDPEITADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADLHHFLRLYDYFYHQEHLFIVTELLQANLYEFQKFKQESGGEEYFTLKRLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGSIDMEMLVKGQETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVTDTTFIDFVRYLLSINPKRRPTARQALRHPWLSYVY* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0499 716 Gene3D Phosphorylase Kinase; domain 1 405 491 - -
Gso14g0499 716 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0499 716 MobiDBLite consensus disorder prediction 67 90 - -
Gso14g0499 716 Pfam Protein kinase domain 412 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0499 716 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 716 - -
Gso14g0499 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Gso14g0499 716 SMART serkin_6 410 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0499 716 Gene3D Transferase(Phosphotransferase) domain 1 464 712 - -
Gso14g0499 716 MobiDBLite consensus disorder prediction 99 118 - -
Gso14g0499 716 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 716 - -
Gso14g0499 716 CDD PKc_DYRK_like 410 712 - -
Gso14g0499 716 SUPERFAMILY Protein kinase-like (PK-like) 399 713 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0499 Gso-Chr14 4781480 4786049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0499 407 707 MAP Kinase Gene Family AT5G19010 31.153 9.37e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso14g0499 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0499 - - gmx:100795722 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0499 14 4781480 4786049 Gso2g2190 2 46574231 46579126 GST