Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0492 ATGACGACGATGACCGGCGGCGACAATCGCGTGAAGGGTTCTTGGAGTCCTCAGGAGGATGCGACGTTGCTGAAACTGGTGAATGAGCACGGGGCACGCAACTGGTCCGTCATAAGCGCCGGCATTCCCGGCCGCTCCGGCAAGTCGTGTCGTCTGCGGTGGTGCAACCAGCTGAGTCCGGAAGTGCAACACCGTCCGTTCACTCCGGCGGAAGACAAGATGATCATTAAGGCGCACGCCATTCACGGAAACAAGTGGGCCACCATCTCACGCCTCCTTCCCGGCCGCACCGACAACGCCATCAAGAATCACTGGAACTCCACCCTCCGCCGCCGTCGCACGGCGGAGCAATCCTCCTCCTCGTCGGCGTCTCCGCCGGCCAAACGACCCTCATCCTTGTTTGACACGCTTCACCCTCTAAAAAAGCAGTGCATTGAAAAGGAAAATGAGGAAGAGAGTCCCGTTACGACGTCGTTGAGCCTTTTCCCTCCTGGGGAAAAATCAGAGGAAGAAGAAGAGGAGGAGGAGAAAGAAGAGTTTGCTAATCAAAAGGTTTCGGATCAGAATTACTTTATGCAGATGATGCAGCGGATGATAGCGGAAGAAGTTAGGAATTACATGGAGACTTTGCGCAATTGCTCCCTTGAGCCTGGATGA 657 0.5525 MTTMTGGDNRVKGSWSPQEDATLLKLVNEHGARNWSVISAGIPGRSGKSCRLRWCNQLSPEVQHRPFTPAEDKMIIKAHAIHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAEQSSSSSASPPAKRPSSLFDTLHPLKKQCIEKENEEESPVTTSLSLFPPGEKSEEEEEEEEKEEFANQKVSDQNYFMQMMQRMIAEEVRNYMETLRNCSLEPG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0492 218 MobiDBLite consensus disorder prediction 103 185 - -
Gso14g0492 218 PANTHER OS01G0850400 PROTEIN 7 201 - -
Gso14g0492 218 SMART sant 63 111 IPR001005 -
Gso14g0492 218 SMART sant 11 60 IPR001005 -
Gso14g0492 218 CDD SANT 14 56 IPR001005 -
Gso14g0492 218 Gene3D - 65 132 - -
Gso14g0492 218 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Gso14g0492 218 Gene3D - 11 63 - -
Gso14g0492 218 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Gso14g0492 218 PANTHER MYB PROTEIN-RELATED 7 201 - -
Gso14g0492 218 MobiDBLite consensus disorder prediction 112 129 - -
Gso14g0492 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Gso14g0492 218 CDD SANT 66 109 IPR001005 -
Gso14g0492 218 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Gso14g0492 218 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Gso14g0492 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Gso14g0492 218 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0492 Gso-Chr14 4662282 4664025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0492 10 119 MYB Transcription Factor Family AT4G37260 71.818 2.56e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso14g0492 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0492 - - gmx:102661292 427.557