Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0491 ATGTCGATTCGTGACTCTGAATCACTGAATTGGCACTACGACACTGAACTCGACGACGAAACCCTCGAAATCCGCGGCCGCAAGCTCTTTTTCATCATCGTCCTCTTCTCCATCATTCTCCTCTTCACCGCGCTCTTCGTCTTCGCGCGCCGGATCTGCCGCCGCCGCCACCACCACCACAATGGCCTCCTCCTCCCCGATGCCGTCCCGCCGCCGCAGAACACCGGCCTCGATTCCGCCGCGATCAAGAGGCTACCGATCGTCCTCCACCCGCGGTGCAACCGCGTGGCGGAGGCGGAGTGCTGCATCTGCCTCGGCGCGTTCGCCGACGGAGAGAAGCTGAAGGTTCTTCCAGGGTGCGACCACAGCTTCCATTGCGAGTGCGTGGATAAGTGGCTCACGAATCACTCCAATTGCCCTCTCTGCAGAGCTTCGCTCAAGCTCGATTCTTCTTCCTTCCCCGCGATTTTGATCCAATCGCCACCCGTTAGAACTAGTCTTCCGGTCTGA 510 0.5961 MSIRDSESLNWHYDTELDDETLEIRGRKLFFIIVLFSIILLFTALFVFARRICRRRHHHHNGLLLPDAVPPPQNTGLDSAAIKRLPIVLHPRCNRVAEAECCICLGAFADGEKLKVLPGCDHSFHCECVDKWLTNHSNCPLCRASLKLDSSSFPAILIQSPPVRTSLPV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0491 169 PANTHER RING-H2 FINGER PROTEIN ATL66 3 153 - -
Gso14g0491 169 Pfam Ring finger domain 100 143 IPR001841 -
Gso14g0491 169 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Gso14g0491 169 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 153 IPR044675 -
Gso14g0491 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 148 IPR013083 -
Gso14g0491 169 SUPERFAMILY RING/U-box 81 152 - -
Gso14g0491 169 SMART ring_2 101 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0491 Gso-Chr14 4653839 4654662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0491 9 152 C3H Transcription Factor Family AT3G11110 45.890 1.09e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0491 - - gmx:102660969 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0226 18 1951993 1952998 Gso14g0491 14 4653839 4654662 PCT
Gso13g1394 13 29468872 29469812 Gso14g0491 14 4653839 4654662 PCT
Gso14g0491 14 4653839 4654662 Gso18g0226 18 1951993 1952998 PCT
Gso14g0491 14 4653839 4654662 Gso13g1394 13 29468872 29469812 PCT