Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0490 ATGGCCTCTCTCCAACCTCAACCCCAAGAAACCAAACCCACCGCCACCACCACCACTGAAACCACTCCCAGCGAAACATCTAACAGTAACACCAACAACAAAATCAGTAGTCGTAAGTGCAAAGGTAAAGGTGGCCCCGACAACAACAAATTTAGGTACCGCGGCGTCAGACAACGAAGCTGGGGCAAATGGGTCGCCGAGATCCGCGAGCCACGCAAGCGAACTCGTAAGTGGCTTGGAACCTTCGCCACCGCCGAGGACGCCGCCAGAGCCTACGACCGCGCCGCCATCATCCTCTACGGTTCCAGGGCACAGCTTAACCTCCAACCCTCCGGTTCCTCTTCTCAATCTTCCTCTTCTCGCTCCTCTTCCTCTTCCACCCAAACCCTAAGACCCTTGCTTCCTCGCCCTTCAGGTTTTTCTGTCAATTTTCCATTTAACACCGCTACCGTGCCTTACCCTTATAACAATAGTCACAATTACACTTACTCCCCACCGGTTCTGTGCCCTAATGATAATCACAATAATAATATAGTGCAAGTTCATCATCCTCATCACCATCGTTGTCCCGAGGAATTGGTGCAAGTGCAAGTGGCACATACTCTATCAACATCGTACCAACATAATTCGGAATCCGATGTGGGTTTAGGTGTGAATAATAATGTTTTTGTTGTTGATGGTTCTATTAGATCAACCTCGTACCAAAGGCATGGTTTTCTGGATAGTAATAATAATCATGTGCATGTGCAAGTGCAACATGGGGTTTTGTCGAATCAACAGCAACAGCAACATCAGAATGGCGTGGTGGTGGAGGGAGTGAATAATTCCCCCGTTGTGGGTTCGGTTGCGTCTGCTATGGATGCTTCTTCGGTGGATCCGGATCTGGCGTTGGTGGGGACAGTGGGGCTTGGATCTTCTTCGCCGTTTTGGTCCATGGCGAACGAGGATGACTACACTGTGCAAATACATTTTGCTGCTGGTGATTGGGAAGCAAATCAACGATGA 1005 0.4945 MASLQPQPQETKPTATTTTETTPSETSNSNTNNKISSRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSGSSSQSSSSRSSSSSTQTLRPLLPRPSGFSVNFPFNTATVPYPYNNSHNYTYSPPVLCPNDNHNNNIVQVHHPHHHRCPEELVQVQVAHTLSTSYQHNSESDVGLGVNNNVFVVDGSIRSTSYQRHGFLDSNNNHVHVQVQHGVLSNQQQQQHQNGVVVEGVNNSPVVGSVASAMDASSVDPDLALVGTVGLGSSSPFWSMANEDDYTVQIHFAAGDWEANQR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0490 334 CDD AP2 52 109 IPR001471 GO:0003700|GO:0006355
Gso14g0490 334 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Gso14g0490 334 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Gso14g0490 334 SUPERFAMILY DNA-binding domain 52 109 IPR016177 GO:0003677
Gso14g0490 334 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 10 321 - -
Gso14g0490 334 MobiDBLite consensus disorder prediction 1 38 - -
Gso14g0490 334 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Gso14g0490 334 MobiDBLite consensus disorder prediction 40 54 - -
Gso14g0490 334 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 321 - -
Gso14g0490 334 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Gso14g0490 334 Pfam AP2 domain 52 100 IPR001471 GO:0003700|GO:0006355
Gso14g0490 334 MobiDBLite consensus disorder prediction 107 134 - -
Gso14g0490 334 MobiDBLite consensus disorder prediction 1 54 - -
Gso14g0490 334 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0490 Gso-Chr14 4643498 4648873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0490 17 170 AP2-EREBP Transcription Factor Family AT2G40220 61.350 2.89e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso14g0490 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0490 K09286 - gmx:100779779 483.796