Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0489 ATGGGAAGTTCCGTGCGCGTAAAAGAAGCATCAGTGATTACACCTTCTGAGCCCACTCCATCAAGCGTGTTGGCTCTATCAGCTCTTGATTCACAACTCTTCCTTCGTTTTACCATAGAGTATCTGTTGGTCTACAACCCTTGCCCAGGCCTGGACCAGGCTGCCACCACGGCCCGTTTAAAAGCCGCATTAGCCCGAGCGCTGGTTCTTTATTATCCTTTTGCGGGCCGGGTCAGGCCTAGGCCCGATGGCCCTGGCCTGGAGGTGGTGTGTGGAGCCCAAGGCGCGGTGTTCATAGAAGCCTCCGCTGACTGTTACAATGTTAACGACTTCGAGAAAGCGCCTAAAACAGTTACGCACTGGAGGTCTCTCTTGTCGCTCCACGTGGCAGACGTTCTCAAAGGATCGCCGCCGTTGGCGGTTCAGCTGACGTGGCTCCGCGACGGCGCCGCCGCACTCGGCGTCGGGATCAACCACTGCATCTGCGACGGGATCGGCAGCGCGGAGTTTCTAAACCACTTCGCCGAGTTAGCCAACGAGAAACGCGAGTTATTATTAGGTCTCAGGCCCAAACAAAAACCTGTCTGGGAGCGTCACCTTCTGAACCCGCCGCGTGGGAAGCAGACGCGGGTTGACTCGGCGAGTCACCCCGAGTTCAACCGAGTCGCTGATTTATGCAACTTCATGAGCAAGGTCTCGACGGGGCTTAAACCAACATCGGTGACCTTCGACAAGAGGAGACTCAACGAGCTTAAGCGACTGGCGCGTTGCACGAGTCAACCAGGCGAGTCGGTGTGTTACACGTCGTTCGAGGTGCTAGCGGCGCACGTGTGGAGAAGCTGGGCGAGAGCAATAGGGTTTCCGCCGAACCAGAAGCTGAAGCTGGTGTTCAGTGTAAACGTGCGGAACCGGGTTAAACCGGGTTTGCCGGAGGGGTATTATGGGAACGCGTTTGTTTTGGGGTGTGCGGAGACGAGTGCAAAGGAGTTGGAGGAAAGAGGGATCGGGTTCGGGTCGGGTTTGGTGAAGCGGGCAAAGGAGAGGGTGGGGAACGAGCACGTGAGGGAGGTGATGGAGTTGGTGTGGGAGAGAAAAGCGTGCCCTGACCCGGTTGGGGTGCTGATAGTGTCGCAGTGGTCTCGGTTAGGGTTGGAGAAGATTGACGTGGGTATGGGGAAGCTTCTTCACGTGGGACCCGTGTGCTGCGATAGGTACTGTTTGTTTTTGCCGCTCAGGGAACACTGTGTGAGTGTCAAGGTCATGGTGGCTGTCCCCACTCTCGCCGTTGACAATTACCAGCTTTTCATGCGCGCGTCGCACCTGTGA 1326 0.5686 MGSSVRVKEASVITPSEPTPSSVLALSALDSQLFLRFTIEYLLVYNPCPGLDQAATTARLKAALARALVLYYPFAGRVRPRPDGPGLEVVCGAQGAVFIEASADCYNVNDFEKAPKTVTHWRSLLSLHVADVLKGSPPLAVQLTWLRDGAAALGVGINHCICDGIGSAEFLNHFAELANEKRELLLGLRPKQKPVWERHLLNPPRGKQTRVDSASHPEFNRVADLCNFMSKVSTGLKPTSVTFDKRRLNELKRLARCTSQPGESVCYTSFEVLAAHVWRSWARAIGFPPNQKLKLVFSVNVRNRVKPGLPEGYYGNAFVLGCAETSAKELEERGIGFGSGLVKRAKERVGNEHVREVMELVWERKACPDPVGVLIVSQWSRLGLEKIDVGMGKLLHVGPVCCDRYCLFLPLREHCVSVKVMVAVPTLAVDNYQLFMRASHL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0489 441 Pfam Transferase family 4 426 - -
Gso14g0489 441 Gene3D - 2 220 IPR023213 -
Gso14g0489 441 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 435 - -
Gso14g0489 441 Gene3D - 231 436 IPR023213 -
Gso14g0489 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0489 Gso-Chr14 4633930 4635615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0489 5 436 Monolignol Biosynthesis Gene Families AT5G48930 25.112 2.30e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0489 - - gmx:100817048 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g1396 13 29493854 29495447 Gso14g0489 14 4633930 4635615 PCT
Gso14g0489 14 4633930 4635615 Gso13g1396 13 29493854 29495447 PCT