Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0488 ATGAAGGGTTATGAGCCACGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTCTTGAAGAGAAGGTGCATACCCAATTGCATATTTGCACCTTACTTTCGCTCTGACGAGTGCAAGAAATTCGCCAAGGTGCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCGTTGAGGTTCCTGAGGAACAGAGAGAGGATACGGTGAATTCGCTTGCTTATGAGGCGGAAGCACGGCTTCGGGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGCTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATACTGCTGCTGCTACTACTGCTACTGCTACTACCACCACTTCTGATGCCTTGATTAATGGCCATGTTAGTTTGCCACCCTTCCCTGATTTTTTCACTTGTGCTGATAATTTCAATAATGACAACTTCTGTCACACCTCTTCGTCTCAATCATCATTCACCAGACATGAAACGGTGGATGATTTCATTCAAATCCCATATATATTTTGA 549 0.4608 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYTAAATTATATTTTSDALINGHVSLPPFPDFFTCADNFNNDNFCHTSSSQSSFTRHETVDDFIQIPYIF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0488 182 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Gso14g0488 182 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Gso14g0488 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 160 - -
Gso14g0488 182 Coils Coil 90 117 - -
Gso14g0488 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0488 Gso-Chr14 4626573 4627573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0488 1 158 AS2 family AT3G11090 60.759 5.02e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso14g0488 LOB 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0488 - - gmx:100777635 359.762