Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso14g0486 | ATGGACAAGAACAGGAAACTCAGTCGGTTCAAGGATCTTTCTATAGCTTTTTGCTTTGTGGCAGTTTTTTTCTTGTTTCACCACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAGGCTTCTGTTGACCCTTGTAACTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGTCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCAACATAAAGTCCATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTACAGTTAAAAGAACTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTAGGGAGTAATATCTCACTAACAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTATCTCCCGAAATAAATGAACTGAGGATGCTTTCCGAATGTCAAGTAGATGAAAATCAGCTGACTAATGCTGCTAAAATGCCAGCTTGTACAGAAAGAGCTACCACAAGGCATATTGGTCAAGGTAAAGGTACTCGTGGCTCACAACATTCTAATACTTCTCCTGCTGCTAATCATTACCAGTTTAATCGTGTGGCTGCTCCACCTCTTGAGAGCCCTTCTTCTCCTTCTGCTTCCCCATCAGGCTCAGCAAAACCACCAGTGCCAAAGCTAGCTCCTCATAGGAAAAATGCTTCTGATTCTTCTCCTCCCCACTCTACATCAGGTTCTGGAACACTATCTAAAACTAAAAGCACCTCATCAAAGGTTCATACAGTTCCTATTTTGGCTGGAGTTATAGGTGGTGCTGTGTTTCTTATTTTTTCAAGCATTGGCATATATCTTTGTAAAACAAAGGTAGCTAATGTCAGACCTTGGGCCATGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGTTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTAATTCACCCATTGGTATACTGTACAAAGGAACTTTGTCTGGTGGCGTTGAAATAGCTGTAGCTTTTGTTTCCATAACATCATCCAAGAATTGGTCAAAAACTTTAGAAGCTCAATTTAGAAGCAAGATAGATAAATTGTCGAAAGTGAACCACAAGAATTTTGTGAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAACGGAACACTATTTGAGCATCTACACATAAAAGAGGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAACGGGTGTGGCTTATTGCCTGCAACATATGCACCAATTAGATCCTCCTATGGCCCTAATCAAGCTGAATTCTTCAGCCGTTTACCTCACCGATGACTACGCTGCCAAACTCTCAGATTTAAGTTTCTCCAATGACATAGCCTCAGCTGAGACAAGAGCTATGGACAAGCCACTAGCAACTCCAGAAAGTAATGTTTATAGCTTGGGTGTTCTACTATTTGAAATGGTCACGGGTCGTCTTCCTTATTCAGTAGAACATAAGGATTCACTTGAAAACTGGGCATCACACTATTTAGAAGTTGACCAACCCCTCAAAGAAATAGTGGATCCAATTCTAGTATCTTACCAAGAAGATCAGCTGGAACAAGTTGCATCATTGATTACATCTTGTGTCCACCCTGATCCACAGAAGAGACCAACAATGAAAGATGTGAGTGAGAGACTGAGAGAGATAACAAAAATAACACCTGAATCTGCGGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGATTGAGATTGCATCTGCAGAAGCACGTTGA | 1932 | 0.4141 | MDKNRKLSRFKDLSIAFCFVAVFFLFHHLGLCCSLNEEGNALLKLRQRIVSDPFDALSNWVDDEASVDPCNWFGVECSDGRVVVLNLKDLCLGGTLAPELVKLVNIKSIILRNNSFSGTIPEGFVQLKELEVLDLGYNNFSGHLPADLGSNISLTILLLDNNEFLVGLSPEINELRMLSECQVDENQLTNAAKMPACTERATTRHIGQGKGTRGSQHSNTSPAANHYQFNRVAAPPLESPSSPSASPSGSAKPPVPKLAPHRKNASDSSPPHSTSGSGTLSKTKSTSSKVHTVPILAGVIGGAVFLIFSSIGIYLCKTKVANVRPWAMGLSGQLQKAFVTGAQKLKRSDLEAACEDFSNVIGNSPIGILYKGTLSGGVEIAVAFVSITSSKNWSKTLEAQFRSKIDKLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVATGVAYCLQHMHQLDPPMALIKLNSSAVYLTDDYAAKLSDLSFSNDIASAETRAMDKPLATPESNVYSLGVLLFEMVTGRLPYSVEHKDSLENWASHYLEVDQPLKEIVDPILVSYQEDQLEQVASLITSCVHPDPQKRPTMKDVSERLREITKITPESAVPKLSPLWWAEIEIASAEAR* | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso14g0486 | 643 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 612 | IPR001245 | GO:0004672|GO:0006468 | |
Gso14g0486 | 643 | MobiDBLite | consensus disorder prediction | 194 | 287 | - | - | |
Gso14g0486 | 643 | Gene3D | Phosphorylase Kinase; domain 1 | 329 | 437 | - | - | |
Gso14g0486 | 643 | Gene3D | Ribonuclease Inhibitor | 33 | 211 | IPR032675 | - | |
Gso14g0486 | 643 | MobiDBLite | consensus disorder prediction | 266 | 287 | - | - | |
Gso14g0486 | 643 | Pfam | Leucine rich repeat N-terminal domain | 36 | 78 | IPR013210 | - | |
Gso14g0486 | 643 | Gene3D | Transferase(Phosphotransferase) domain 1 | 438 | 624 | - | - | |
Gso14g0486 | 643 | ProSiteProfiles | Protein kinase domain profile. | 355 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso14g0486 | 643 | SUPERFAMILY | L domain-like | 41 | 191 | - | - | |
Gso14g0486 | 643 | SUPERFAMILY | Protein kinase-like (PK-like) | 349 | 632 | IPR011009 | - | |
Gso14g0486 | 643 | MobiDBLite | consensus disorder prediction | 208 | 227 | - | - | |
Gso14g0486 | 643 | PANTHER | PROTEIN MALE DISCOVERER 2 | 1 | 640 | - | - | |
Gso14g0486 | 643 | Pfam | Leucine rich repeat | 105 | 163 | IPR001611 | GO:0005515 | |
Gso14g0486 | 643 | PANTHER | LRR RECEPTOR-LIKE KINASE | 1 | 640 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso14g0486 | Gso-Chr14 | 4610019 | 4614347 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso14g0486 | 13 | 615 | Receptor kinase-like Gene Family | AT1G25320 | 24.552 | 5.07e-46 | 172 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Gso14g0486 | PK_Tyr_Ser-Thr | 1.1e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso14g0486 | - | - | gmx:100820416 | 1212.98 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso18g0220 | 18 | 1901132 | 1905425 | Gso14g0486 | 14 | 4610019 | 4614347 | PCT | |
Gso13g1401 | 13 | 29526542 | 29530782 | Gso14g0486 | 14 | 4610019 | 4614347 | PCT | |
Gso14g0486 | 14 | 4610019 | 4614347 | Gso18g0220 | 18 | 1901132 | 1905425 | PCT | |
Gso14g0486 | 14 | 4610019 | 4614347 | Gso13g1401 | 13 | 29526542 | 29530782 | PCT |