Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0486 ATGGACAAGAACAGGAAACTCAGTCGGTTCAAGGATCTTTCTATAGCTTTTTGCTTTGTGGCAGTTTTTTTCTTGTTTCACCACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAGGCTTCTGTTGACCCTTGTAACTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGTCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCAACATAAAGTCCATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTACAGTTAAAAGAACTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTAGGGAGTAATATCTCACTAACAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTATCTCCCGAAATAAATGAACTGAGGATGCTTTCCGAATGTCAAGTAGATGAAAATCAGCTGACTAATGCTGCTAAAATGCCAGCTTGTACAGAAAGAGCTACCACAAGGCATATTGGTCAAGGTAAAGGTACTCGTGGCTCACAACATTCTAATACTTCTCCTGCTGCTAATCATTACCAGTTTAATCGTGTGGCTGCTCCACCTCTTGAGAGCCCTTCTTCTCCTTCTGCTTCCCCATCAGGCTCAGCAAAACCACCAGTGCCAAAGCTAGCTCCTCATAGGAAAAATGCTTCTGATTCTTCTCCTCCCCACTCTACATCAGGTTCTGGAACACTATCTAAAACTAAAAGCACCTCATCAAAGGTTCATACAGTTCCTATTTTGGCTGGAGTTATAGGTGGTGCTGTGTTTCTTATTTTTTCAAGCATTGGCATATATCTTTGTAAAACAAAGGTAGCTAATGTCAGACCTTGGGCCATGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGTTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTAATTCACCCATTGGTATACTGTACAAAGGAACTTTGTCTGGTGGCGTTGAAATAGCTGTAGCTTTTGTTTCCATAACATCATCCAAGAATTGGTCAAAAACTTTAGAAGCTCAATTTAGAAGCAAGATAGATAAATTGTCGAAAGTGAACCACAAGAATTTTGTGAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAACGGAACACTATTTGAGCATCTACACATAAAAGAGGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAACGGGTGTGGCTTATTGCCTGCAACATATGCACCAATTAGATCCTCCTATGGCCCTAATCAAGCTGAATTCTTCAGCCGTTTACCTCACCGATGACTACGCTGCCAAACTCTCAGATTTAAGTTTCTCCAATGACATAGCCTCAGCTGAGACAAGAGCTATGGACAAGCCACTAGCAACTCCAGAAAGTAATGTTTATAGCTTGGGTGTTCTACTATTTGAAATGGTCACGGGTCGTCTTCCTTATTCAGTAGAACATAAGGATTCACTTGAAAACTGGGCATCACACTATTTAGAAGTTGACCAACCCCTCAAAGAAATAGTGGATCCAATTCTAGTATCTTACCAAGAAGATCAGCTGGAACAAGTTGCATCATTGATTACATCTTGTGTCCACCCTGATCCACAGAAGAGACCAACAATGAAAGATGTGAGTGAGAGACTGAGAGAGATAACAAAAATAACACCTGAATCTGCGGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGATTGAGATTGCATCTGCAGAAGCACGTTGA 1932 0.4141 MDKNRKLSRFKDLSIAFCFVAVFFLFHHLGLCCSLNEEGNALLKLRQRIVSDPFDALSNWVDDEASVDPCNWFGVECSDGRVVVLNLKDLCLGGTLAPELVKLVNIKSIILRNNSFSGTIPEGFVQLKELEVLDLGYNNFSGHLPADLGSNISLTILLLDNNEFLVGLSPEINELRMLSECQVDENQLTNAAKMPACTERATTRHIGQGKGTRGSQHSNTSPAANHYQFNRVAAPPLESPSSPSASPSGSAKPPVPKLAPHRKNASDSSPPHSTSGSGTLSKTKSTSSKVHTVPILAGVIGGAVFLIFSSIGIYLCKTKVANVRPWAMGLSGQLQKAFVTGAQKLKRSDLEAACEDFSNVIGNSPIGILYKGTLSGGVEIAVAFVSITSSKNWSKTLEAQFRSKIDKLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVATGVAYCLQHMHQLDPPMALIKLNSSAVYLTDDYAAKLSDLSFSNDIASAETRAMDKPLATPESNVYSLGVLLFEMVTGRLPYSVEHKDSLENWASHYLEVDQPLKEIVDPILVSYQEDQLEQVASLITSCVHPDPQKRPTMKDVSERLREITKITPESAVPKLSPLWWAEIEIASAEAR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0486 643 Pfam Protein tyrosine and serine/threonine kinase 358 612 IPR001245 GO:0004672|GO:0006468
Gso14g0486 643 MobiDBLite consensus disorder prediction 194 287 - -
Gso14g0486 643 Gene3D Phosphorylase Kinase; domain 1 329 437 - -
Gso14g0486 643 Gene3D Ribonuclease Inhibitor 33 211 IPR032675 -
Gso14g0486 643 MobiDBLite consensus disorder prediction 266 287 - -
Gso14g0486 643 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gso14g0486 643 Gene3D Transferase(Phosphotransferase) domain 1 438 624 - -
Gso14g0486 643 ProSiteProfiles Protein kinase domain profile. 355 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0486 643 SUPERFAMILY L domain-like 41 191 - -
Gso14g0486 643 SUPERFAMILY Protein kinase-like (PK-like) 349 632 IPR011009 -
Gso14g0486 643 MobiDBLite consensus disorder prediction 208 227 - -
Gso14g0486 643 PANTHER PROTEIN MALE DISCOVERER 2 1 640 - -
Gso14g0486 643 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Gso14g0486 643 PANTHER LRR RECEPTOR-LIKE KINASE 1 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0486 Gso-Chr14 4610019 4614347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0486 13 615 Receptor kinase-like Gene Family AT1G25320 24.552 5.07e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso14g0486 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0486 - - gmx:100820416 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0220 18 1901132 1905425 Gso14g0486 14 4610019 4614347 PCT
Gso13g1401 13 29526542 29530782 Gso14g0486 14 4610019 4614347 PCT
Gso14g0486 14 4610019 4614347 Gso18g0220 18 1901132 1905425 PCT
Gso14g0486 14 4610019 4614347 Gso13g1401 13 29526542 29530782 PCT