Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0471 ATGGAGAACAAGAACCTGACCTCGAAATGTTTTTTTTACTACAACCCAAGTCATTTTTTCCGGTTGTTTTTCTGTTTGTGGATTCTCATGGTACCAGTGGCGAGTGAAGAGCGTTGGGATGGGGTGGTTGTGACGCAATCAAACTTCCTAGCACTTCAAGCGTTCAAGCAAGAGCTGGTTGATCCCAAAGGCTTCTTGAGAAGCTGGAACGACAGTGGCTATGGAGCTTGTTCTGGAGCTTGGGTTGGCATCAAGTGTGCTCAGGGACAGGTCATTGTGATCCAGCTTCCATGGAAGGGGTTGAAGGGTCACATAACTGAGAGGATTGGCCAACTTAGGGGGCTTAGAAAGCTTAGCCTTCATGATAACCAAATTGCTGGTTCAATCCCTTCAGCACTTGGACTTCTTCTCAATCTAAGAGGGGTTCAGCTCTTCAACAATAGGTTCACAGGGACCATCCCTCCTTCGTTAGGGTCATGTCCTTTGCTTCAGTCTTTGGACCTCAGCAATAATTTGCTCACTGGGACAATCCCCATGAGCCTTGGGAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTTTAACTCCTTGTCTGGCCCAATGCCAACTAGCTTAACTTCTCTCACCTACCTATCTCTTCAACACAATAACCTCTCGGGCTCTATTCCTAACTCATGGGGTGGTAGCTTGAAAAATAACTTCTTTCGGCTTCGAAATCTGATCATAGATCATAACTTGTTGAGTGGAAGCATTCCTGCTTCTTTGGGTGGCTTGAGTGAACTCACAGAGATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATCCCAAATGAAATAGGAAACCTTTCTAGACTTAAAACTCTGGATTTTTCTAACAATGCCTTGAATGGAAGCTTGCCTGCCGCTCTCTCTAATGTTTCCTCACTCACTCTCTTGAATGTAGAGAACAACCACCTTGGCAATCAAATCCCAGAAGCCTTAGGCAGATTGCATAATCTTTCTGTTCTAGTTCTGAGCAGAAACCAATTTAGTGGCCACATTCCTCAAAATATTGGAAACATTTCAAAGCTTAGGCAGCTTGATTTGTCACTGAATAATCTTAGTGGAGAAATTCCAGTCGCCTTTGATAATCTGCGTAGTCTTAGTTTCTTCAACGTTTCTCATAACAACCTCTCTGGTCCAGTTCCCACCCTACTTGCCCAAAAATTTAACTCGAGCTCATTTGTGGGGAATATTCAACTATGTGGCTATAGCCCTTCAACCACATGTCCCTCCCTAGCTCCTTCTGGTTCACCTCCTGAAATATCAGAACACCGTCATCATAAGAAATTAGGCACCAAAGACATAATTCTCATAGTAGCAGGAGTGCTCCTTGTAGTCCTGGTAACAATTTGCTGCATTCTGCTATTCTGCTTGATAAAAAAAAGAGCAACATCAAATGCTGAGGGTGGCCAGGCCACGGGGAGAGCATCTGCAGCAGCAGCTGGCAGGACAGAAAAAGGAGTCCCTCCTGTCGCAGGCGAAGCCGAAGCGGGTGGCGAGGTCGGAGGCAAACTAGTCCATTTTGATGGACCATTGACCTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGTACATATGGAACTGTGTATAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTGAAACGATTGAGGGAAAAGATCACTAAAGGTCAAAGAGAATTTGAATCTGAAGTTAGTGTTATAGGAAGAATTCGACACCCGAATCTTTTGGCATTAAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTAGTATTTGATTACATGCCTAATGGGAGTCTTGCTTCTTTCCTACATTCTCGTGGGCCAGAAACAGCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGGAATGGCTCATGGCTTGTTATACCTTCATTCCAGGGAGAACATTATACATGGAAACCTTACGTCCAGCAATGTGCTGCTGGATGAGAATGTGAATGCTAAAATAGCCGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTCATTGCCACTGCTGGAGCATTGGGATACCGAGCACCTGAGCTCTCGAAGCTGAAAAAAGCCAACACAAAAACAGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGAGTGGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGTAGAGTTGATGAGAGATGCTTCAACATACGGCGACGAGATGCTGAACACGTTGAAGCTTGCTTTGCACAGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTCCTTCAGCAGCTTGAAGAGATTAGACCAGAGATATCAGCAGCCAGTTCGGGTGACGATGGAGCCATCCCTTCGACTAGTGAATGA 2481 0.4486 MENKNLTSKCFFYYNPSHFFRLFFCLWILMVPVASEERWDGVVVTQSNFLALQAFKQELVDPKGFLRSWNDSGYGACSGAWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLRGLRKLSLHDNQIAGSIPSALGLLLNLRGVQLFNNRFTGTIPPSLGSCPLLQSLDLSNNLLTGTIPMSLGNATKLYWLNLSFNSLSGPMPTSLTSLTYLSLQHNNLSGSIPNSWGGSLKNNFFRLRNLIIDHNLLSGSIPASLGGLSELTEISLSHNQFSGAIPNEIGNLSRLKTLDFSNNALNGSLPAALSNVSSLTLLNVENNHLGNQIPEALGRLHNLSVLVLSRNQFSGHIPQNIGNISKLRQLDLSLNNLSGEIPVAFDNLRSLSFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTTCPSLAPSGSPPEISEHRHHKKLGTKDIILIVAGVLLVVLVTICCILLFCLIKKRATSNAEGGQATGRASAAAAGRTEKGVPPVAGEAEAGGEVGGKLVHFDGPLTFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPNGSLASFLHSRGPETAIDWPTRMKIAQGMAHGLLYLHSRENIIHGNLTSSNVLLDENVNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLALHSVDPSPSARPEVQQVLQQLEEIRPEISAASSGDDGAIPSTSE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0471 826 Pfam Leucine rich repeat 332 391 IPR001611 GO:0005515
Gso14g0471 826 CDD STKc_IRAK 541 806 - -
Gso14g0471 826 PRINTS Leucine-rich repeat signature 163 176 - -
Gso14g0471 826 PRINTS Leucine-rich repeat signature 282 295 - -
Gso14g0471 826 Gene3D Transferase(Phosphotransferase) domain 1 613 819 - -
Gso14g0471 826 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 814 - -
Gso14g0471 826 Gene3D Ribonuclease Inhibitor 46 203 IPR032675 -
Gso14g0471 826 Gene3D Ribonuclease Inhibitor 204 298 IPR032675 -
Gso14g0471 826 Gene3D Ribonuclease Inhibitor 299 425 IPR032675 -
Gso14g0471 826 Gene3D Phosphorylase Kinase; domain 1 541 612 - -
Gso14g0471 826 SMART LRR_typ_2 258 281 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 205 228 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 306 330 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 112 136 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 354 377 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 282 305 IPR003591 -
Gso14g0471 826 SMART LRR_typ_2 378 401 IPR003591 -
Gso14g0471 826 Pfam Leucine rich repeat N-terminal domain 50 86 IPR013210 -
Gso14g0471 826 ProSiteProfiles Protein kinase domain profile. 535 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0471 826 Pfam Protein tyrosine and serine/threonine kinase 538 803 IPR001245 GO:0004672|GO:0006468
Gso14g0471 826 SUPERFAMILY Protein kinase-like (PK-like) 539 807 IPR011009 -
Gso14g0471 826 SUPERFAMILY L domain-like 85 425 - -
Gso14g0471 826 MobiDBLite consensus disorder prediction 807 826 - -
Gso14g0471 826 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0471 Gso-Chr14 4457781 4461003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0471 39 808 Receptor kinase-like Gene Family AT3G51740 64.020 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso14g0471 PK_Tyr_Ser-Thr 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0471 - - gmx:100811174 1532.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0205 18 1761006 1764215 Gso14g0471 14 4457781 4461003 PCT
Gso13g1413 13 29647787 29651237 Gso14g0471 14 4457781 4461003 PCT
Gso14g0471 14 4457781 4461003 Gso18g0205 18 1761006 1764215 PCT
Gso14g0471 14 4457781 4461003 Gso13g1413 13 29647787 29651237 PCT