Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0469 ATGAGGAAGAACACGAAGCAACTGAGGACGAGGAAAAGGATGAGAATGAGAATTAGGATGATGATGATGACGACAATAATCATGAGTATAAAGAAATGGAAGAAGAAAGTTAAGAAGAAAATAGTGCTGAATACACGAGGAGTCAAACTCATCATCGTAGAGCCTGCAAAACTTATCCCAGATGCTTTTGTGAAATCTACACGCTTACAAGGATGGAGGATCCCTGAGGATGTCATCCTCACAAATGTTGGTAGGAGAGTTTGGAATGTGAAAACACGTCTTGTTGGAAACAAAATTTACTTTGAAGAGGGTTGGAAGGTTTTTCAAGAAGAAAACTTTTTAGGAAAAGAAGATTATCTTGTTTTTAAGTATGATGGGGCCAACATTTTCAAGGTTGTAATTCTTGAACAATCATCACGGTGTGAAAGGACAGAAGCTGAAGAAGAGGATGAGGTGATAGAGATTACAGATGATGAAGAACATGAAGAAGCTGAGGATGATGAGGATGAAGGTGATGATGATGATCAGTATAGAGAAATGGAAGAAGAACATAGTGCTGAATACATGAGGAGTCAAAGTCATCCTCGTAGAGCTTCCAAAAGGTTGAGTGCAACAAGTTGCAGTCCTGCGGTTGAAGGTCCTCATCTTGAAGACTATGAATTTGATCCGCAAATGTATATTCAGCCGGGAAATCCAAATTTTGAAGCAAAGCTCTTCAAAAATAGACCCAACGAATTGCATGTTCCAAAAAATGTGATTAAGGACTCGTCCCTTACTTTTGGAGAACAGATTACCCTTTCACGTTGCCAATGCTTCCAATTCGAGGATACTCAAAGAGATGAATTACGAGACTATCATGGCTTGCCACAATGGACACCCATATATTCGGAAGTAGCAAAAGTGTCTGAGTGGCGTGATGGTCGAGTATGTATCAAAGGGTGGACAAGTTTTTGTAAAAAGAACAAGATAAATAAAAATGATGCATGCATCTGTGAAATTATATCAGGAGAAGATCGAATAATAAGAACAATTCAGGTGCATGTGCTTGGTGCTAGAAACGGATGA 1065 0.3906 MRKNTKQLRTRKRMRMRIRMMMMTTIIMSIKKWKKKVKKKIVLNTRGVKLIIVEPAKLIPDAFVKSTRLQGWRIPEDVILTNVGRRVWNVKTRLVGNKIYFEEGWKVFQEENFLGKEDYLVFKYDGANIFKVVILEQSSRCERTEAEEEDEVIEITDDEEHEEAEDDEDEGDDDDQYREMEEEHSAEYMRSQSHPRRASKRLSATSCSPAVEGPHLEDYEFDPQMYIQPGNPNFEAKLFKNRPNELHVPKNVIKDSSLTFGEQITLSRCQCFQFEDTQRDELRDYHGLPQWTPIYSEVAKVSEWRDGRVCIKGWTSFCKKNKINKNDACICEIISGEDRIIRTIQVHVLGARNG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0469 354 Gene3D - 48 141 IPR015300 -
Gso14g0469 354 ProSiteProfiles B3 DNA-binding domain profile. 59 138 IPR003340 GO:0003677
Gso14g0469 354 SMART B3_2 234 344 IPR003340 GO:0003677
Gso14g0469 354 SMART B3_2 48 138 IPR003340 GO:0003677
Gso14g0469 354 Pfam B3 DNA binding domain 58 134 IPR003340 GO:0003677
Gso14g0469 354 MobiDBLite consensus disorder prediction 142 216 - -
Gso14g0469 354 CDD B3_DNA 59 135 IPR003340 GO:0003677
Gso14g0469 354 MobiDBLite consensus disorder prediction 147 180 - -
Gso14g0469 354 SUPERFAMILY DNA-binding pseudobarrel domain 228 350 IPR015300 -
Gso14g0469 354 Gene3D - 220 352 IPR015300 -
Gso14g0469 354 PANTHER B3 DOMAIN-CONTAINING 39 351 - -
Gso14g0469 354 SUPERFAMILY DNA-binding pseudobarrel domain 59 137 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0469 Gso-Chr14 4441751 4451965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0469 74 349 B3 DNA Binding Superfamily AT3G06160 26.537 5.49e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso14g0469 B3 6.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0469 - - gsj:114383647 595.504