Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0432 ATGAGGAAAAGGGAGAGGGAGAATCCTTGTGGCGTGTGTGGCCACTATCACAAATATGAAGAAGGGGAAGTGTGTTCGATTTGCGGTCACCGGATTCCGGTTGGATCGGAGAAAACTTCGATACAAGTTAGTGCTTTTCCTTCCGTTGTTCTGCCGGAATTTCTTTACCTAGGAAGCTACGACAACGCATCACGCTCGGAGCTTCTGAAGACTCAGGGGATTTCTCGTATCCTCAATACCGTCCCTTCTTGTCAAAATCTCTACAAGAACTCGTTTACCTATCACTGCCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCAATTCAGTTTCTTGAGCAATGTGAGAAGGATAAGGAGCGTGTTCTGGTTCATTGCATGTCAGGAAAGAGTAGGTCTCCAGCTATTGTGATTGCATACTTGATGAAGTCCAAAGGATGGAGACTTGTACACAGTTATCAGTGGGTAAAGGAACGGAGACCTTCTGTTGAATTAACTCAAGGTGTGTACCAGCAGCTGCAGGAGTTTGAGGAAAAGATCTATGGACGGATCGATAGTGGAAGCTCTCTGGTGCCTGGTTTCTTGCCTGCAGCACCTCCTTCAATTAGCTTTGGTTTTCCAAAGATCAATGATCCAGCTCAACTTCCCTCATTCAGCGCTGGAACTCCTTCAATCTTCGCGCGAGCACCTCTAGACATTGCTCCTACCGAGTTTACATTTGGTGCAGGTCAGACTCAGAAGAATGTGGCTGGAAATCCCTTTAATGCAAATCCAGCAAATCCAAATGGCACTGATATCCAAATGGATGGTTCTTGA 816 0.4583 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVVLPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKERVLVHCMSGKSRSPAIVIAYLMKSKGWRLVHSYQWVKERRPSVELTQGVYQQLQEFEEKIYGRIDSGSSLVPGFLPAAPPSISFGFPKINDPAQLPSFSAGTPSIFARAPLDIAPTEFTFGAGQTQKNVAGNPFNANPANPNGTDIQMDGS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0432 271 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Gso14g0432 271 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Gso14g0432 271 MobiDBLite consensus disorder prediction 250 271 - -
Gso14g0432 271 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 271 - -
Gso14g0432 271 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 271 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Gso14g0432 271 CDD DSP_plant_IBR5-like 47 176 - -
Gso14g0432 271 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Gso14g0432 271 Gene3D Protein tyrosine phosphatase superfamily 40 186 IPR029021 -
Gso14g0432 271 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Gso14g0432 271 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Gso14g0432 271 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0432 Gso-Chr14 4121353 4127302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0432 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 75.148 2.40e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0432 K04459 - gmx:100806021 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0432 14 4121353 4127302 Gso2g2262 2 47249017 47254274 GST