Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0429 ATGATTTCCCTGTTGAATTTAAATGGCTTCTATTTTTCCCACCACGCCATGCTTCCAAAACCCCTTTCACAAAAAACCCCATCTTCCATTTCTCTCAAAGTTCGATGCTTTCGAGCTTCTGAACCCATCCCTCTTCCCTCTTCTTCTCCTTTAAGTTCCGTTCTCTCGTCACGTTCCCCCAAACGTGTCTCTCGCCTCTTGAGGTCCGAAGCTCAACACGCTCTAATGGATTACATGCATTCCACGCGTGGCTACACTTTCTCCGACGCCGAGTACATCAGCGAGAACTCACCACGTTTTATTGAATCATTGGTCTCAATGATTGACGACAAAGATGATGTTCTTCGGTCGTTGGAAAGATTCCTCAGGTACAACCCCATTAACGAGTTTGAACCATTTTTCGAGAGTTTGGGAATTGACCCTTCTGAGTTGTATTTGTTTCTTCCCCATGGTATGTTTTTCCTGGCTGATGATCATGTGCTGCTTCAAAATTTTCATGCTTTGTGTAACTATGGGGTGCCAAGGAATCGAATGGGGAAGTTTTTTAAAGAGGCAAAAGAGATTTTTGGGTATGCTAGTGGGGTGCTGTTGTCAAAGTTAGAAGCTTATGAGAATTTGGGTTTGAGGAAATCAACTGTTGTCAAGCTTGTTGTTTGTTGCCCTTTGCTTTTGGTTGGTGATGTGAATTTTGAATTTGTTTCCGTGCTTGATTGGTTGAAGAGAATTGGGATTGAGAGTGATTGGATGGTGAATTACTTGTCTTGTTCAAGGACATATAGTTGGAAAAGAATGCTTGATGCCATGCTGTTTCTTCATAAAGTGGGTTATTCCGAGGAACAAATGCACAATTTGTTTAGGGAAAATCCTAAGTTGTTGTTGGAGGGTTTTGGGAGGAAAGTGTACTTAGTTTTTGGTAGATTGCTTAAAGTTGGTGTTGAGATGAATGTGGTTTATTCTTATTTTGTAGAGTATCCCAATATCTTGTTGAATAAGTGTGCGAACGATATGTTGAGAGTGATTGACTTTTTGGGTGCTATTGGAATGGGAAAAGATGACATTACACACATTTTGTCTAAGTACATGCATCTCCTGATTACACGTTCCTTGAAAGGTCATAAAACTGTTTGTCAGGAGTTAAAAGTTGGAAAAGCTGATTTGTACCAAATCATAAAGGATGATCCATTGAAGCTAATTAGTTTGGCATCAAAACAGGAGCAGAAGGGCAATGGAAAGGTAGATAGTCATGACCCACGTAACTATTTGGAAAAGACAACTTTCTTGCTGAAATTGGGATACATTGAGAACTCTGAAGAGATGGCCAAAGCATTAAAAATGTTTCGAGGGAGAGGTGATCAATTACAAGAGAGGTTTGATTGCCTGGTAGAAGCTGGCTTGGACTATAACAGTGTGATTGAAATGATAAAACGAGCTCCTATGATTCTAAGCCAGAACAAAGCTGTAATTCAAAAGAAGATTGATTTCTTAAAAAATGTTTTAGATTACCCTCTAGAAGGTCTCGTGGGATTCCCAACATACTTTTGCCATGATTTGGACAAAATTGTTGAAAGACTTTCAATGTATGCATGGCTGAAGGAGAGGAATGCTGTAAATCCTACATTAACCCTGAGTACCATAATTGCATCCAATGATAAACGCTTTGTAAAGTACTTTGTGAATGTGCATCCTCAAGGTTCAGCCATCTGGAAGGGCTTAAAAAGATTATCAAATAAAGATAAGAACTAA 1743 0.3947 MISLLNLNGFYFSHHAMLPKPLSQKTPSSISLKVRCFRASEPIPLPSSSPLSSVLSSRSPKRVSRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKDDVLRSLERFLRYNPINEFEPFFESLGIDPSELYLFLPHGMFFLADDHVLLQNFHALCNYGVPRNRMGKFFKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKRIGIESDWMVNYLSCSRTYSWKRMLDAMLFLHKVGYSEEQMHNLFRENPKLLLEGFGRKVYLVFGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGMGKDDITHILSKYMHLLITRSLKGHKTVCQELKVGKADLYQIIKDDPLKLISLASKQEQKGNGKVDSHDPRNYLEKTTFLLKLGYIENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNKAVIQKKIDFLKNVLDYPLEGLVGFPTYFCHDLDKIVERLSMYAWLKERNAVNPTLTLSTIIASNDKRFVKYFVNVHPQGSAIWKGLKRLSNKDKN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0429 580 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 SMART mt_12 179 209 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 SMART mt_12 436 466 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 SMART mt_12 319 349 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 Pfam mTERF 270 497 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 Pfam mTERF 450 553 IPR003690 GO:0003690|GO:0006355
Gso14g0429 580 Gene3D Transcription termination factor 3, mitochondrial 127 300 IPR038538 -
Gso14g0429 580 Gene3D Transcription termination factor 3, mitochondrial 301 569 IPR038538 -
Gso14g0429 580 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 47 572 - -
Gso14g0429 580 PANTHER CGI-12 PROTEIN-RELATED 47 572 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0429 Gso-Chr14 4089750 4093027 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso14g0429 mTERF 4.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0429 - - gmx:100803162 1125.54