Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0420 ATGCAACTGGCGGCAGAACTCCAACGCACCCATCACCGCCACCAAAGGCAAAGGCAACAACAGGACACCACCCCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCGTCGCCGGAGACGCCGTCGCTGACGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCAAACCCTCGGCCTTCGTTCCATCATATATCTGTGTCCTGAGCCGTATCCGGAGGCCAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTTTCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTAGAAGTTGTTCTTGATGTCAGGAACCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGCTTGGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCCGTCTTTGATGAATACCAACGCTTTGCAGCCGCCAAAGCAAGAGTTTCAGATCAGAGATTGGACTAA 585 0.5145 MQLAAELQRTHHRHQRQRQQQDTTPMCRQIQLTISDHTVAGDAVADDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALEVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRLD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0420 194 MobiDBLite consensus disorder prediction 1 25 - -
Gso14g0420 194 CDD PFA-DSP_Siw14 51 192 - -
Gso14g0420 194 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 194 IPR020422 GO:0006470|GO:0008138
Gso14g0420 194 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 193 IPR029021 -
Gso14g0420 194 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 193 - -
Gso14g0420 194 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Gso14g0420 194 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 12 193 - -
Gso14g0420 194 Gene3D Protein tyrosine phosphatase superfamily 51 193 IPR029021 -
Gso14g0420 194 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Gso14g0420 194 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Gso14g0420 194 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Gso14g0420 194 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Gso14g0420 194 Pfam Tyrosine phosphatase family 53 192 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0420 Gso-Chr14 3960635 3967195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0420 48 193 Protein tyrosine phosphatase (PTP) family AT4G03960 78.767 3.56e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0420 K18045 - gmx:100799968 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0420 14 3960635 3967195 Gso2g2273 2 47396250 47403463 GST