Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0412 ATGTTACGTGGAGAATCCTCCTCAAATTCTCCGAATGCGTCTTCGCGATTGACCTACCATGTTTTCTTGAGTTTTAGAACGGAAGGCACCCATTTAGATTTTGCTAACACCTTATGTACTTCGTTGCAGCGAAATGGAATCTCAACTTTCAGATATGATAAACAAAAGGAAAGAGGATATGTGATTTTGGAAAAACTTCATAAAGTAATTGAGCAGTGCCTCGTTGTCATTGTTCTTCTCTCCGAGAACTATGCTTCTTCCACTTGGTGTTTGGATGAACTCCACAAGATTCTTAAATCGAAGAGGGTGCTGGGGACACCAGTTTTTCCTCTCTTTTATGATGTCGTTCCTTCCGATGTTCGACACCAGAAAAATAAATTCGCTGAGGCTTTCGAAGAACATGCAACAAGACCTGAAGAAGACAAAGTGAAGGTACAAAAATGGAGAGAATCCTTGCATGAAGTTGCTGGTTTTTCTGGCTGGGAGTCTAAGAATTGGAAAAAAGAAGAGCTCATTGAAGAAATTATTGAGTCGGTATGGACAAAACTACGTCCTAAACTGCCATCATACGATGATGGACTGGTTGGAATTGATTCAAGAGTTGAGAAAATGAATTCACTTTTGAAACTAGAATTGAAAGACAAAGTTTGCTTCATTGGAATATGGGGCATGGGTGGCATCGGAAAGACGACTCTAGCGAGAGTTGTATTTAAGAAAATACGTAACAAATTTGATATTAGTTGCTTCCTTGAAAACGTAAGGGAGATTTCTCAGAATAGTGATGGCATGCTTAGCTTACAAGGAAAACTTCTTTCTCACATGAAAATGAAAGACTTGAAAATACAAAATTTGGACGAAGGAAAAAGCATCATAGGAGGTATCTTATTCAACAACAAAGTTCTCCTGGTCCTTGATGATGTTAATGACATAAGACAACTAGAGAATTTGAGTGTGAATGATCAAAAGTGGTTAGGCCCTGGAAGCAGGATTATAATAATTACAAGAGACATGGAAGTACTAAGATCACATGGAACAGTTGAAAGTTACAAAATTGATCTCTTAAATTCTGATGAATCCCTTCAACTCTTCAGTCAGAAAGCATTTAAAAGAGATCAACCATTAGAACATCTATTGCAGTTGTCAAAAGTGGCTGTCCAACAAGCTGGAGGCCTTCCTCTGGCCATTGAGATGATGGGTTCATCCTTCTGTGGGAGAAGTGAATCTCAATGGAAAGAATTTTTGGAAGTGAAAGAATACACAAAGAAAGATGTTGTGATGGACAAACTTATAATAAGCTATGATGGGTTACCGCCAAATTATAAGATTTTATTTCTTGATATTGCATGTTTCTTCAATGGGTGGGTAAAAGAGCATGTGACACAAATTCTAACTATTTGTGGCCGTTATCCAGCAAATGGAATTGACGTTCTAATTGATAAATCGCTAGCAACTTATGATGGATCACGTTTATGGATGCATGATTTGCTTCAAGAAATGGGAAGGAAAATTGTTGTTGAAGAATGTCCTATAGATGCTGGCAAACGCAGTAGGTTGTGGTCACCCCAAGACACTGATCAAGCACTGAAAAGAAATAAGGAAAATGAATTGATTCAGGGTATAGTTTTGCAATCGTCAACTCAACCATACAATGCAAATTGGGATCCCGAAGCCTTCTCAAAGATGTACAATCTTAAATTCCTTGTAATTAATTATCACAACATACAAGTTCCTCGTGGCATCAAATGTCTTTGCAGTTCAATGAAATTTCTTCAGTGGACGGGGTGTACTTTGAAAGCTTTGCCACTTGGTGTGAAGCTAGAGGAACTTGTAGAGTTGAAAATGCGTTACAGCAAAATAAAAAAAATCTGGAGTGGATCTCAACATTTCGCAAAGTTGAAGTTCATTGATCTGAGCCATTCCGAAGATTTAATAGAAAGTCCTATAGTTTCTGGAGTTCCATGTCTGGAAATTTTGCTTCTTGAAGGTTGTATAAACCTTGTTGAGGTTCACCAGTCTGTTGGACAGCACAAGAAACTTGTTCTATTGAACTTGAAAGGCTGCATAAATCTTCAAACCCTTCCAACAAAATTTGAAATGGATTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAAGTTAAAAAGCTCCCCAACTTTGGAAAAAATATGCAACATTTATCACTGGTTAATTTGGAGAAATGCAAAAATCTTCTTTGGCTACCAAAGTCTATTTGGAATCTGAAATCTCTTAGGAAGCTCAGTATTTGTGGTTGCTCAAAATTTTCTACCTTGCCCAACAGCATGAATGAAAATGGGTCTTTGGAGGAACTTGATGTGAGTGGGACTCCCATAAGAGAAATTACTTCTTCCAAAGTTTGTTTAGAAAATCTTAAAGAGCTCTCTTTTGGTGGAAGGAACGAACTAGCATCCAACTCATTATGGAACTTACATCAAAGGATTTCAATGCATAGGAGGCAACAAGTCCCGAAGGAGTTGATCTTGCCTACTCTCTCCCGCTTAACAAGCTTGAAGTTCTTGAATTTAAGTTATTGTGACCTTAATGATGAATCAATTCCAGATAGTCTTGGATCCTTATTATCTTTGTTGGGCTTAAATCTAAGTGGGAACAATTTTGTTAGTCCACCTACTCGTTGCATTAGTAATCTTCATACCCTGCAGAGTTTGACCTTAATTGATTGCCCAAGGCTTGAGTCTTTGCCTATGCTTCCACCAAGTGCTCAATGCTTGGGTACAACTAATAGTACTCAAATGAAACCCTTGAATTCAGATGCATATATGCTGTGGAAGATTTATGAGTTACATATGAATCAGACATACTTTTTATATACTCATTCTCTCCCTACTCTGCCCCTTACCCACCCAAATTATTTCCATAAAGTGTGTGCTTACCAAATGGAAGATAGACCACATTTTTTGTTCATCATTCCAGGGAGAGAGATTCAGAAATGGAATGAAGTGTTCTTTCTAATTGATCCATCACATCATCCATATAACAGGCTGGGTTCTGATTCAGTTGCATCAATAATAGTGGATGTACCTAACTATCTTGTGTCTAGTGGATGGTTAGGAATTGCAATATGCCTAGCATTGGAACCTCCAAATATGCAGCACTCTTCTCCATCACATGTGAGTCCACATCCTGTGGGAAATGAGGATACGTGCATTTATTATTGGGCATGTAAAGTTCCTCAGGGTGAACCTGACTTGACTTTCCCCATAGGACCTAAATTTAGCCACTTTGTTTATGAATGCAACGAAGAGAAATGCCAACTTCAATTGATATTTTATGTGGAGAATCATTCTAAGCCATGGAAGCCAAGAATAAGGAAGTGTGCTAGCGTTATGAGATTTTGCCAAGAATAA 3384 0.3806 MLRGESSSNSPNASSRLTYHVFLSFRTEGTHLDFANTLCTSLQRNGISTFRYDKQKERGYVILEKLHKVIEQCLVVIVLLSENYASSTWCLDELHKILKSKRVLGTPVFPLFYDVVPSDVRHQKNKFAEAFEEHATRPEEDKVKVQKWRESLHEVAGFSGWESKNWKKEELIEEIIESVWTKLRPKLPSYDDGLVGIDSRVEKMNSLLKLELKDKVCFIGIWGMGGIGKTTLARVVFKKIRNKFDISCFLENVREISQNSDGMLSLQGKLLSHMKMKDLKIQNLDEGKSIIGGILFNNKVLLVLDDVNDIRQLENLSVNDQKWLGPGSRIIIITRDMEVLRSHGTVESYKIDLLNSDESLQLFSQKAFKRDQPLEHLLQLSKVAVQQAGGLPLAIEMMGSSFCGRSESQWKEFLEVKEYTKKDVVMDKLIISYDGLPPNYKILFLDIACFFNGWVKEHVTQILTICGRYPANGIDVLIDKSLATYDGSRLWMHDLLQEMGRKIVVEECPIDAGKRSRLWSPQDTDQALKRNKENELIQGIVLQSSTQPYNANWDPEAFSKMYNLKFLVINYHNIQVPRGIKCLCSSMKFLQWTGCTLKALPLGVKLEELVELKMRYSKIKKIWSGSQHFAKLKFIDLSHSEDLIESPIVSGVPCLEILLLEGCINLVEVHQSVGQHKKLVLLNLKGCINLQTLPTKFEMDSLEELILSGCSKVKKLPNFGKNMQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLPNSMNENGSLEELDVSGTPIREITSSKVCLENLKELSFGGRNELASNSLWNLHQRISMHRRQQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPDSLGSLLSLLGLNLSGNNFVSPPTRCISNLHTLQSLTLIDCPRLESLPMLPPSAQCLGTTNSTQMKPLNSDAYMLWKIYELHMNQTYFLYTHSLPTLPLTHPNYFHKVCAYQMEDRPHFLFIIPGREIQKWNEVFFLIDPSHHPYNRLGSDSVASIIVDVPNYLVSSGWLGIAICLALEPPNMQHSSPSHVSPHPVGNEDTCIYYWACKVPQGEPDLTFPIGPKFSHFVYECNEEKCQLQLIFYVENHSKPWKPRIRKCASVMRFCQE* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0412 1127 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 724 939 - -
Gso14g0412 1127 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 728 - -
Gso14g0412 1127 PRINTS Disease resistance protein signature 218 233 - -
Gso14g0412 1127 PRINTS Disease resistance protein signature 294 308 - -
Gso14g0412 1127 PRINTS Disease resistance protein signature 388 402 - -
Gso14g0412 1127 PRINTS Disease resistance protein signature 627 643 - -
Gso14g0412 1127 Pfam TIR domain 19 194 IPR000157 GO:0007165
Gso14g0412 1127 Gene3D - 183 348 IPR027417 -
Gso14g0412 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Gso14g0412 1127 Pfam NB-ARC domain 202 415 IPR002182 GO:0043531
Gso14g0412 1127 Pfam Leucine Rich Repeat 609 627 IPR011713 -
Gso14g0412 1127 SUPERFAMILY L domain-like 491 910 - -
Gso14g0412 1127 Gene3D Ribonuclease Inhibitor 772 931 IPR032675 -
Gso14g0412 1127 Gene3D - 13 182 IPR035897 -
Gso14g0412 1127 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Gso14g0412 1127 SMART till_3 18 158 IPR000157 GO:0007165
Gso14g0412 1127 ProSiteProfiles TIR domain profile. 17 187 IPR000157 GO:0007165
Gso14g0412 1127 Gene3D - 353 437 IPR042197 -
Gso14g0412 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 724 939 IPR044974 GO:0006952
Gso14g0412 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 728 IPR044974 GO:0006952
Gso14g0412 1127 Gene3D Ribonuclease Inhibitor 550 698 IPR032675 -
Gso14g0412 1127 Gene3D Ribonuclease Inhibitor 699 771 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0412 Gso-Chr14 3892521 3898118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0412 11 802 WRKY Transcription Factor Family AT4G12020 30.972 9.64e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0412 - - gmx:100798387 2240.69