Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0410 ATGGTTTTCACTAAGCTTTCATTGATTGGTCTAATTCTGTGTTCACTCCTAAGCCTCCATTCCTCCCAAATTTTCAGGTTTTCTTCTTTTGCCTTTGCTGCCATCACTGCTTATGAAGGGACCGAAGCAAGTGCTCTACTTGAGTGGAGAGCTAGCCTTGATAACCAAAGCCAAGCTTCTCTGTCTTCATGGACAAGTGGTGTCAGTCCTTGCAGGTGGAAAGGAATCGTTTGTAAAGAATCCAACTCTGTGACCGCTATAAGTGTCACAAATCTTGGGCTAAAAGGTACTCTTCACACTCTCAACTTCTCTTCCTTTCCCAAGCTGCTAACTCTGGATATCAGTTACAACCGTTTTAGTGGAACTATTCCTCAGCAAATTGCTAACTTGTCCAGAGTTTCTCGGTTGATAATGGATGATAATCTTTTTAATGGCTCAATCCCTATCTCCATGATGAAGTTGTCTAGCTTGTCATGGCTAAACTTAGCAAGCAATAAACTTTCTGGCTACATTCCTAAGGAGATTGGACAACTGCGGAGCTTGAAGTATTTATTACTTGGATTCAATAACCTTTATGGCACCATTCCTCCAACAATTGGAATGTTGGCCAACCTCGTTGAACTTAATCTGTCAAGTAACTCCATCTCTGGTCAAATTCCTTCAGTTAGAAACTTGACAAATTTAGAAAGCCTTAAGCTCTCAGACAATAGTCTTTCTGGCCCCATTCCACCCTACATAGGAGACTTGGTCAATTTGATTGTCTTTGAAATCGATCAAAATAATATTTCAGGATTAATTCCTTCCAGTATTGGAAACTTGACAAAGCTGGTCAATATGTCCATTGGCACTAACATGATTTCTGGATCAATTCCTACCTCCATCGGAAACTTGGTCAATCTAATGATCTTAGACCTTTGTCAAAACAATATTTCCGGAACTATTCCTGCCACCTTTGGAAATTTGACAAAGCTCACCTATTTACTAGTGTTCGAAAACACACTTCATGGTAGATTACCACCCGCAATGAATAACCTCACCAATTTCATAAGCTTACAACTATCTACAAACAGTTTTACTGGCCCTTTGCCGCAACAAATTTGCCTTGGTGGTTCACTTGACCAATTTGCTGCTGACTATAATTATTTCACGGGTCCGGTTCCAAAAAGCCTGAAAAATTGCTCCAGTCTTTACAGACTCAGACTAGATGGAAACCGGTTGACCGGAAATATATCAGATGTTTTTGGTGTATATCCAGAGTTGAACTACATTGATCTGAGTAGCAATAACTTTTATGGCCACATTTCACCAAACTGGGCTAAGTGTCCTGGTCTCACAAGCCTTAGGATATCCAACAACAATTTATCTGGTGGTATACCCCCAGAACTCGGCCAGGCACCCAAATTACAAGTACTAGTCTTGTCTTCAAATCATCTAACAGGAAAAATTCCAAAGGAACTTGGGAACCTGACCACTTTGTGGAAGTTGTCAATAGGCGACAATGAACTTTCTGGCAACATTCCTGCAGAAATAGGAGACTTGTCTCGCCTTACAAATCTTAAGCTTGCAGCAAATAATTTAGGTGGCCCGGTTCCAAAACAGGTGGGAGAGTTGCACAAGTTACTTTACTTGAACTTGAGCAAGAATGAATTCACAGAAAGCATTCCATCAGAATTTAACCAATTGCAATCTCTTCAAGATCTTGACCTTAGTAGGAATTTGTTAAACGGAAAAATACCAGCAGAACTTGCAACTTTGCAAAGATTGGAAACACTAAACCTCTCAAACAACAATCTATCAGGAGCCATTCCTGATTTTAAGAATAGCTTGGCAAATGTTGACATATCTAACAACCAATTGGAGGGTTCAATTCCTAACATTCCAGCCTTTCTTAATGCTCCATTTGATGCATTGAAAAATAATAAAGGCTTGTGTGGAAATGCCTCCAGTTTGGTGCCTTGCGACACCCCATCTCATGATAAAGGGAAAAGAAATGTCATCATGTTGGCATTACTTCTTACTTTGGGTTCTCTAATTCTAGTGGCATTCGTGGTTGGAGTTTCGTTATGCATTTGCAATCGAAGAGCAAGCAAAGGCAAAAAGGTGGAGGCTGAAGAAGAAAGAAGTCAGGATCATTATTTCATATGGAGTTATGATGGAAAATTAGTGTATGAAGATATCTTGGAAGCCACAGAGGGGTTTGATGATAAATATCTCATTGGAGAAGGAGGGTCTGCATCTGTTTATAAGGCAATATTACCCACAGAACATATTGTTGCTGTGAAAAAACTTCATGCTTCAACCAACGAGGAAACACCCGCTTTAAGAGCTTTTACAACTGAGGTTAAAGCCTTGGCAGAGATCAAGCATCGTAACATTGTGAAGTCACTTGGATATTGTTTACATTCACGCTTCTCCTTTTTGGTTTACGAGTTCCTAGAGGGTGGTAGCTTGGATAAAGTACTAACCGATGATACGCGTGCAACAATGTTTGATTGGGAAAGGAGGGTGAAGGTTGTTAAAGGTGTGGCAAGTGCTTTGTACTATATGCATCATGGTTGCTTTCCTCCTATTGTTCACCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGATTATGAAGCCCACATCTCTGACTTCGGAACAGCTAAAATTCTGAATCCTGATTCACAAAATTTAACCGTGTTTGCAGGCACATGTGGATATTCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGTGATGTTTTTAGTTTTGGAGTGCTTTGTTTGGAAATAATGATGGGAAAACATCCAGGGGATCTGATTTCTTCACTATTATCACCCTCTGCAATGTCATCAGTGTCCAATTTGCTGTTAAAAGATGTGTTGGAGCAACGACTACCTCATCCAGAGAAGCCAGTTGTTAAGGAGGTGATCTTGATTGCAAAAATAACATTAGCTTGCTTAAGTGAAAGTCCACGTTTTCGCCCAAGCATGGAACAAGTGTATAACGAGTTTGTGATGCCAAGATCATCTTCAGTGAATTTATTATCCATGATCACACTTGGTCAACTCAGAGATAATTGA 3078 0.3996 MVFTKLSLIGLILCSLLSLHSSQIFRFSSFAFAAITAYEGTEASALLEWRASLDNQSQASLSSWTSGVSPCRWKGIVCKESNSVTAISVTNLGLKGTLHTLNFSSFPKLLTLDISYNRFSGTIPQQIANLSRVSRLIMDDNLFNGSIPISMMKLSSLSWLNLASNKLSGYIPKEIGQLRSLKYLLLGFNNLYGTIPPTIGMLANLVELNLSSNSISGQIPSVRNLTNLESLKLSDNSLSGPIPPYIGDLVNLIVFEIDQNNISGLIPSSIGNLTKLVNMSIGTNMISGSIPTSIGNLVNLMILDLCQNNISGTIPATFGNLTKLTYLLVFENTLHGRLPPAMNNLTNFISLQLSTNSFTGPLPQQICLGGSLDQFAADYNYFTGPVPKSLKNCSSLYRLRLDGNRLTGNISDVFGVYPELNYIDLSSNNFYGHISPNWAKCPGLTSLRISNNNLSGGIPPELGQAPKLQVLVLSSNHLTGKIPKELGNLTTLWKLSIGDNELSGNIPAEIGDLSRLTNLKLAANNLGGPVPKQVGELHKLLYLNLSKNEFTESIPSEFNQLQSLQDLDLSRNLLNGKIPAELATLQRLETLNLSNNNLSGAIPDFKNSLANVDISNNQLEGSIPNIPAFLNAPFDALKNNKGLCGNASSLVPCDTPSHDKGKRNVIMLALLLTLGSLILVAFVVGVSLCICNRRASKGKKVEAEEERSQDHYFIWSYDGKLVYEDILEATEGFDDKYLIGEGGSASVYKAILPTEHIVAVKKLHASTNEETPALRAFTTEVKALAEIKHRNIVKSLGYCLHSRFSFLVYEFLEGGSLDKVLTDDTRATMFDWERRVKVVKGVASALYYMHHGCFPPIVHRDISSKNVLIDLDYEAHISDFGTAKILNPDSQNLTVFAGTCGYSAPELAYTMEVNEKCDVFSFGVLCLEIMMGKHPGDLISSLLSPSAMSSVSNLLLKDVLEQRLPHPEKPVVKEVILIAKITLACLSESPRFRPSMEQVYNEFVMPRSSSVNLLSMITLGQLRDN* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0410 1025 SUPERFAMILY Protein kinase-like (PK-like) 713 1002 IPR011009 -
Gso14g0410 1025 SMART LRR_typ_2 441 465 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 537 560 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 154 178 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 225 249 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 202 224 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 297 320 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 466 489 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 585 607 IPR003591 -
Gso14g0410 1025 SMART LRR_typ_2 561 584 IPR003591 -
Gso14g0410 1025 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Gso14g0410 1025 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Gso14g0410 1025 Gene3D Transferase(Phosphotransferase) domain 1 812 1012 - -
Gso14g0410 1025 Pfam Protein kinase domain 735 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0410 1025 SUPERFAMILY L domain-like 195 503 - -
Gso14g0410 1025 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 1023 - -
Gso14g0410 1025 Gene3D Ribonuclease Inhibitor 204 318 IPR032675 -
Gso14g0410 1025 Gene3D Ribonuclease Inhibitor 39 198 IPR032675 -
Gso14g0410 1025 Gene3D Ribonuclease Inhibitor 332 655 IPR032675 -
Gso14g0410 1025 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Gso14g0410 1025 Gene3D Phosphorylase Kinase; domain 1 693 811 - -
Gso14g0410 1025 SUPERFAMILY L domain-like 42 253 - -
Gso14g0410 1025 ProSitePatterns Tyrosine protein kinases specific active-site signature. 857 869 IPR008266 GO:0004672|GO:0006468
Gso14g0410 1025 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 1023 - -
Gso14g0410 1025 Pfam Leucine rich repeat 514 574 IPR001611 GO:0005515
Gso14g0410 1025 Pfam Leucine rich repeat 442 502 IPR001611 GO:0005515
Gso14g0410 1025 ProSiteProfiles Protein kinase domain profile. 733 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0410 1025 ProSiteProfiles Leucine-rich repeat profile. 587 609 IPR001611 GO:0005515
Gso14g0410 1025 SUPERFAMILY L domain-like 419 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0410 Gso-Chr14 3871914 3876208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0410 29 905 Receptor kinase-like Gene Family AT4G08850 43.511 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso14g0410 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0410 - - gmx:100797314 1936.38