Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0408 ATGATGTTCTCTAAGCTTTCATTACTTCGTCTAATTATATGTTCACTCTTAAGCCTCCATTCCTCCCAACTTTTCACGTCTACCTCTTTTGCCTTTGCTGCCATCACTGCTGAAAACCAAGAGAGGGAAGCAGCTGCTCTACTTGAGTGGAGAGTGAGTCTTGACAACCAAAGCCAAGCTTCTTTGTCATCATGGTCCAGTGGTGTAAGTCCTTGCACGTGGAAAGGAATCGTTTGTGATGATTCCAACTCTGTGACCGCTATAAATGTGGCAAATCTTGGGCTAAAAGGTACTCTTCACAGTCTCAAATTTTCATCTTTTCCCAAGCTGCTAACTCTGGATATTAGTAACAACAGTTTTAATGGAATCATTCCTCAGCAAATTTCTAACTTGTCTAGAGTTTCTCAGTTGAAAATGGATGCTAATCTTTTTAGTGGTTCAATCCCCATTTCCATGATGAAGTTGGCTAGCTTGTCTTTGCTAGACTTAACAGGCAATAAACTTTCTGGTACCATTCCATCAATTAGAAACTTGACAAATTTAGAACATCTTAAGCTCGCAAACAATAGTCTCTCTGGTCCCATCCCACCCTACATAGGAGAGTTGGTGAATTTGAAAGTTCTTGATTTTGAAAGTAATAGAATTTCGGGATCAATTCCTTCAAATATTGGAAATTTGACAAAGCTCGGCATTTTTTTCTTAGCCCATAACATGATCTCTGGATCCGTTCCCACCTCCATTGGAAACTTGATCAATCTAGAGTCGCTGGACCTTTCTAGGAACACTATTTCCGGAGTTATTCCTTCTACCCTTGGAAATTTGACAAAGCTCAATTTTTTATTAGTGTTTAATAACAAACTTCATGGTACATTACCACCAGCACTGAATAACTTTACCAAACTCCAAAGCTTACAACTATCTACAAATCGTTTCACCGGTCCTTTGCCACAACAAATTTGCATAGGTGGGTCACTGAGAAAATTTGCTGCTAATGGTAATTCTTTCACCGGTTCAGTTCCAAAAAGCCTGAAAAATTGCTCCAGTCTTACCAGAGTAAACCTATCAGGAAACCGGTTGAGCGGAAATATCTCAGATGCTTTTGGTGTGCATCCAAAGTTAGACTTCGTTGACCTGAGTAACAATAATTTTTATGGTCACATTTCACCAAACTGGGCTAAGTGTCCTAGTCTCACAAGCCTTAAGATATCCAACAACAATTTATCTGGTGGTATACCACCAGAACTAGGCTGGGCACCCATGTTACAGGAACTTGTCTTGTTTTCAAATCATCTAACAGGAAAAATTCCAAAAGAACTTGGGAACTTGACCTCTTTGTTTGATCTATCAATAGGTGACAATGAACTTTTTGGCAACATTCCTACCGAAATAGGTGCTTTGTCCCGCCTTGAAAATTTGGAGCTTGCAGCAAATAATTTAGGTGGCCCAATTCCAAAACAGGTGGGATCTTTACACAAATTACTTCACTTGAACTTGAGCAACAACAAATTCACAGAAAGCATTCCTTCGTTTAACCAATTGCAATCTCTTCAAGATCTTGACCTTGGTAGGAATTTGTTAAATGGAAAAATACCAGCAGAACTTGCAACTTTGCAAAGATTGGAAACACTAAACCTCTCACACAACAATCTCTCTGGAACCATTCCTGATTTTAAGAATAGCTTGGCAAATGTTGACATATCTAACAACCAATTGGAGGGTTCAATTCCTAGCATTCCAGCCTTTCTTAATGCTTCATTTGATGCATTGAAAAATAATAAAGGCTTGTGTGGAAATGCCTCCGGTTTGGTGCCTTGCCACACCCTACCTCATGGTAAAATGAAAAGAAATGTCATCATCCAGGCATTACTCCCTGCTTTGGGGGCTCTATTTCTATTATTATTGATGATTGGAATTTCGTTGTGTATTTATTATCGAAGAGCAACAAAGGCCAAAAAGGAGGAGGCTAAAGAAGAACAAACCAAGGATTATTTTTCCATTTGGAGTTATGATGGAAAATTAGTGTATGAAAGTATCATTGAAGCCACAGAGGGGTTTGATGACAAATATCTCATTGGAGAAGGTGGGTCTGCATCTGTTTATAAGGCAAGTTTATCCACTGGGCAAATTGTTGCTGTGAAAAAACTACATGCTGTACCCGACGAGGAAACACTCAACATAAGAGCTTTTACAAGTGAGGTTCAAGCCTTGGCAGAAATCAAGCATCGTAACATTGTGAAGTTAATTGGATATTGTTTACATCCCTGCTTCTCCTTTTTGGTTTATGAGTTCCTAGAGGGAGGTAGCTTGGATAAATTACTAAACGATGATACGCATGCAACACTGTTTGATTGGGAAAGGAGGGTGAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTGTTCATCGAGACATATCAAGCAAGAATGTTCTTATAGATTTGGATTATGAAGCCCGAGTCTCTGACTTTGGAACAGCTAAAATTCTGAAGCCTGATTCACAAAATTTAAGCTCGTTTGCAGGCACCTATGGGTATGCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGTGATGTCTTCAGTTTCGGAGTTCTTTGTTTGGAAATAATGATGGGGAAGCATCCAGGCGATCTCATTTCTTCATTTTTTTCATCCCCTGGAATGTCATCGGCGTCTAATTTGCTGTTAAAGGATGTGTTGGACCAACGACTACCTCAACCAGTGAATCCAGTTGACAAGGAGGTGATCTTGATAGCAAAAATAACATTTGCTTGCTTAAGTGAAAGTCCACGTTTTCGCCCAAGCATGGAACAAGTGTATAACGAGTTTGTGATGCCAACATCATCTTCAGTGAATTTATTCTCCATGGTCACACTTAGTCAACTCGTTGATAATTGA 2934 0.3943 MMFSKLSLLRLIICSLLSLHSSQLFTSTSFAFAAITAENQEREAAALLEWRVSLDNQSQASLSSWSSGVSPCTWKGIVCDDSNSVTAINVANLGLKGTLHSLKFSSFPKLLTLDISNNSFNGIIPQQISNLSRVSQLKMDANLFSGSIPISMMKLASLSLLDLTGNKLSGTIPSIRNLTNLEHLKLANNSLSGPIPPYIGELVNLKVLDFESNRISGSIPSNIGNLTKLGIFFLAHNMISGSVPTSIGNLINLESLDLSRNTISGVIPSTLGNLTKLNFLLVFNNKLHGTLPPALNNFTKLQSLQLSTNRFTGPLPQQICIGGSLRKFAANGNSFTGSVPKSLKNCSSLTRVNLSGNRLSGNISDAFGVHPKLDFVDLSNNNFYGHISPNWAKCPSLTSLKISNNNLSGGIPPELGWAPMLQELVLFSNHLTGKIPKELGNLTSLFDLSIGDNELFGNIPTEIGALSRLENLELAANNLGGPIPKQVGSLHKLLHLNLSNNKFTESIPSFNQLQSLQDLDLGRNLLNGKIPAELATLQRLETLNLSHNNLSGTIPDFKNSLANVDISNNQLEGSIPSIPAFLNASFDALKNNKGLCGNASGLVPCHTLPHGKMKRNVIIQALLPALGALFLLLLMIGISLCIYYRRATKAKKEEAKEEQTKDYFSIWSYDGKLVYESIIEATEGFDDKYLIGEGGSASVYKASLSTGQIVAVKKLHAVPDEETLNIRAFTSEVQALAEIKHRNIVKLIGYCLHPCFSFLVYEFLEGGSLDKLLNDDTHATLFDWERRVKVVKGVANALYHMHHGCFPPIVHRDISSKNVLIDLDYEARVSDFGTAKILKPDSQNLSSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEIMMGKHPGDLISSFFSSPGMSSASNLLLKDVLDQRLPQPVNPVDKEVILIAKITFACLSESPRFRPSMEQVYNEFVMPTSSSVNLFSMVTLSQLVDN* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0408 977 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Gso14g0408 977 ProSiteProfiles Protein kinase domain profile. 685 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0408 977 Pfam Protein kinase domain 687 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0408 977 Gene3D Ribonuclease Inhibitor 224 322 IPR032675 -
Gso14g0408 977 Pfam Leucine rich repeat 509 550 IPR001611 GO:0005515
Gso14g0408 977 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Gso14g0408 977 SMART LRR_typ_2 202 226 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 107 131 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 178 200 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 250 273 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 490 512 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 298 322 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 513 536 IPR003591 -
Gso14g0408 977 SMART LRR_typ_2 537 563 IPR003591 -
Gso14g0408 977 SMART LRR_sd22_2 442 461 - -
Gso14g0408 977 SMART LRR_sd22_2 202 225 - -
Gso14g0408 977 SMART LRR_sd22_2 226 252 - -
Gso14g0408 977 SMART LRR_sd22_2 155 180 - -
Gso14g0408 977 SMART LRR_sd22_2 466 492 - -
Gso14g0408 977 SMART LRR_sd22_2 513 536 - -
Gso14g0408 977 PRINTS Leucine-rich repeat signature 253 266 - -
Gso14g0408 977 PRINTS Leucine-rich repeat signature 537 550 - -
Gso14g0408 977 Gene3D Phosphorylase Kinase; domain 1 645 763 - -
Gso14g0408 977 SUPERFAMILY RNI-like 284 578 - -
Gso14g0408 977 ProSiteProfiles Leucine-rich repeat profile. 492 514 IPR001611 GO:0005515
Gso14g0408 977 Gene3D Ribonuclease Inhibitor 157 223 IPR032675 -
Gso14g0408 977 Gene3D Ribonuclease Inhibitor 42 156 IPR032675 -
Gso14g0408 977 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 174 - -
Gso14g0408 977 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 163 975 - -
Gso14g0408 977 Gene3D Ribonuclease Inhibitor 323 606 IPR032675 -
Gso14g0408 977 SUPERFAMILY L domain-like 59 383 - -
Gso14g0408 977 Gene3D Transferase(Phosphotransferase) domain 1 764 964 - -
Gso14g0408 977 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 163 975 - -
Gso14g0408 977 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 174 - -
Gso14g0408 977 ProSiteProfiles Leucine-rich repeat profile. 539 561 IPR001611 GO:0005515
Gso14g0408 977 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Gso14g0408 977 Pfam Leucine Rich Repeat 180 201 IPR001611 GO:0005515
Gso14g0408 977 ProSitePatterns Tyrosine protein kinases specific active-site signature. 809 821 IPR008266 GO:0004672|GO:0006468
Gso14g0408 977 SUPERFAMILY Protein kinase-like (PK-like) 667 954 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0408 Gso-Chr14 3844696 3848094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0408 27 857 Receptor kinase-like Gene Family AT4G08850 42.037 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso14g0408 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0408 - - gmx:100795732 1799.25