Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0406 ATGGTGTTCATTAAGCTTTCATTAATTCGTCTAATTCTCTGCTCACTCTTAAGCCTCCATTACTCCCATCTTTTCACATTTTCTTCTTTTGCCTTTGCTGCCATCACTGCTAATGAAGTTGCAGAAAACCAAGAGATGGAAGCAAGTGAAAGTGCTCTACTTGAGTGGAGAGAGAGTCTTGACAACCAAAGCCAAGCTTCTCTGTCTTCATGGACCAGTGGTGTCAGTCCTTGCAGGTGGAAAGGAATCGTTTGTGACGAATCCATCTCTGTGACCGCTATAAATGTTACAAATCTTGGGCTACAAGGTACTCTTCACACTCTCAACTTCTCATCCTTTCCCAAGCTGCTAACTCTGGATATTAGTCACAACAGTTTTAGTGGAACTATTCCTCAGCAAATTGCTAACTTGTCCAGTGTTTCTCAATTGATAATGAGTGCTAATAATTTTAGTGGTCCAATCCCCATTTCCATGATGAAGTTGGCTAGCTTGTCAATTCTAAACTTGGAATACAATAAACTTTCTGGCTCTATTCCTGAGGAGATTGGAGAATTGCAGAACTTGAAGAGTCTAATACTTCAATGGAATCAACTTTCTGGTACCATTCCTCCAACAATTGGAAGGTTGTCCAACCTTGTTAGAGTTGACTTAACAGAGAACTCAATCTCTGGTACAATCCCCACTTCAATTACAAACTTGACAAATTTAGAACTCCTTCAGTTCTCAAACAATAGACTTTCTGGCTCCATTCCATCCTCCATAGGAGACTTGGTCAATTTGACTGTTTTTGAAATCGATGATAATAGAATTTCAGGTTCAATTCCTTCCAATATTGGAAACTTGACAAAGCTGGTCAGTATGGTCATTGCCATTAACATGATTTCTGGATCAATTCCTACCTCCATCGGAAACTTGGTCAATCTACAGTTCTTTGTCCTTTATGAGAACAATATCTCCGGAGTTATTCCTTCCACCTTTGGAAATTTGACAAACCTCGAGGTTTTCAGTGTCTTTAATAACAAACTTGAAGGCAGATTAACACCAGCATTGAATAACATTACCAATTTAAATATCTTTCGACCAGCCATCAATAGTTTCACTGGCCCCTTGCCACAACAAATTTGCCTTGGTGGGCTACTTGAAAGTTTTACTGCTGAAAGTAATTATTTCACGGGTCCAGTTCCAAAAAGCCTGAAAAATTGTTCCCGTCTTTACAGACTCAAACTAAATGAAAACCAGTTGACCGGAAATATATCAGATGTTTTTGGTGTATATCCAGAGTTGGACTACGTTGATCTGAGTAGCAATAACTTTTATGGCCACATTTCACCAAACTGGGCAAAGTGTCCTAATCTCACAAGCCTTAAGATGTCCAACAACAATTTATCTGGTGGTATACCCCCAGAACTCGGCCAGGCACCCAACTTACGAGTACTAGTCTTGTCTTCAAATCATCTAACAGGAAAATTTCCAAAAGAACTTGGGAACTTGACCGCTTTGTTGGAGTTATCAATAGGCGACAATGAACTTTCTGGCAACATTCCTGCCGAAATAGCAGCCTGGTCCGGCATTACACGTCTCGAGCTTGCAGCAAATAATTTAGGTGGCCCGGTTCCAAAACAGGTGGGAGAGTTGCGCAAGTTACTTTACTTGAACTTGAGCAAGAATGAATTCACAGAAAGCATTCCATCAGAATTTAGCCAATTGCAATCTCTTCAAGATCTCGATCTTAGTTGTAATTTGCTAAATGGAGAAATACCAGCAGCACTTGCGAGTATGCAAAGATTGGAAACACTAAACCTCTCACACAACAATCTCTCAGGAGCCATTCCTGATTTTCAGAATAGCTTGTTAAATGTTGACATATCTAACAACCAATTGGAGGGCTCAATTCCTAGCATTCCAGCCTTTCTTAATGCTTCATTTGATGCATTGAAAAATAATAAAGGCCTGTGTGGAAAAGCCTCCAGTTTGGTGCCTTGCCACACCCCACCTCATGATAAAATGAAAAGAAATGTCATCATGCTGGCATTACTCCTTTCTTTCGGCGCTCTATTTCTATTATTATTGGTGGTTGGAATTTCTTTATGTATTTACTACCGAAGAGCAACAAAGGCCAAAAAGGAGGAGGATAAAGAAGAAAAAAGTCAGGATCATTATTCCCTTTGGATTTATGATGGAAAAATAGAGTATAAAGATATCATTGAAGCCACAGAGGGGTTTGATGACAAATATCTCGTTGGAGAAGGAGGAACTGCATCTGTTTATAAGGCAAAATTACCCGCAGGACAGATTGTTGCTGTGAAAAAACTTCATGCTGCACCCAACGAGGAAACACCCGATTCAAAAGCTTTTTCAACTGAGGTTAAAGCCTTGGCCGAAATCAAGCACCGTAACATTGTGAAGTCACTAGGATATTGTTTACATCCACGTTTTTCCTTTTTGATTTATGAGTTCCTAGAGGGTGGTAGCTTGGATAAAGTACTAACCGATGATACGCGTGCAACAATGTTTGATTGGGAAAGGAGGGTGAAGGTTGTTAAAGGTGTGGCAAGTGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTGTTCACCGTGACATATCAAGTAAGAATGTTCTTATAGATTTGGATTATGAAGCCCACATCTCTGACTTCGGAACAGCTAAAATTCTGAATCCTGATTCACAAAATATAACCGCGTTTGCAGGCACATATGGGTATTCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGTGATGTCTTCAGTTTTGGAGTGCTTTGTTTGGAAATAATAATGGGAAAGCATCCAGGGGATCTCATTTCTTCATTGTTTTCATCATCTGCGTCTAATTTGCTATTAATGGATGTGTTGGACCAGCGACTACCTCATCCAGTGAAGCCAATTGTTGAACAAGTGATCTTGATTGCAAAATTAACATTTGCTTGCTTAAGTGAGAATCCACGCTTTCGCCCAAGTATGGAACAAGTGCATAACGAGTTTGTGATGCCAAAATCATCTTCTTTGGATCCACTCCCCATGATCACACTTGGTCAACTATCTAAATAA 3087 0.3988 MVFIKLSLIRLILCSLLSLHYSHLFTFSSFAFAAITANEVAENQEMEASESALLEWRESLDNQSQASLSSWTSGVSPCRWKGIVCDESISVTAINVTNLGLQGTLHTLNFSSFPKLLTLDISHNSFSGTIPQQIANLSSVSQLIMSANNFSGPIPISMMKLASLSILNLEYNKLSGSIPEEIGELQNLKSLILQWNQLSGTIPPTIGRLSNLVRVDLTENSISGTIPTSITNLTNLELLQFSNNRLSGSIPSSIGDLVNLTVFEIDDNRISGSIPSNIGNLTKLVSMVIAINMISGSIPTSIGNLVNLQFFVLYENNISGVIPSTFGNLTNLEVFSVFNNKLEGRLTPALNNITNLNIFRPAINSFTGPLPQQICLGGLLESFTAESNYFTGPVPKSLKNCSRLYRLKLNENQLTGNISDVFGVYPELDYVDLSSNNFYGHISPNWAKCPNLTSLKMSNNNLSGGIPPELGQAPNLRVLVLSSNHLTGKFPKELGNLTALLELSIGDNELSGNIPAEIAAWSGITRLELAANNLGGPVPKQVGELRKLLYLNLSKNEFTESIPSEFSQLQSLQDLDLSCNLLNGEIPAALASMQRLETLNLSHNNLSGAIPDFQNSLLNVDISNNQLEGSIPSIPAFLNASFDALKNNKGLCGKASSLVPCHTPPHDKMKRNVIMLALLLSFGALFLLLLVVGISLCIYYRRATKAKKEEDKEEKSQDHYSLWIYDGKIEYKDIIEATEGFDDKYLVGEGGTASVYKAKLPAGQIVAVKKLHAAPNEETPDSKAFSTEVKALAEIKHRNIVKSLGYCLHPRFSFLIYEFLEGGSLDKVLTDDTRATMFDWERRVKVVKGVASALYHMHHGCFPPIVHRDISSKNVLIDLDYEAHISDFGTAKILNPDSQNITAFAGTYGYSAPELAYTMEVNEKCDVFSFGVLCLEIIMGKHPGDLISSLFSSSASNLLLMDVLDQRLPHPVKPIVEQVILIAKLTFACLSENPRFRPSMEQVHNEFVMPKSSSLDPLPMITLGQLSK* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0406 1028 SUPERFAMILY L domain-like 185 439 - -
Gso14g0406 1028 Gene3D Transferase(Phosphotransferase) domain 1 820 1014 - -
Gso14g0406 1028 ProSitePatterns Protein kinases ATP-binding region signature. 747 770 IPR017441 GO:0005524
Gso14g0406 1028 SUPERFAMILY L domain-like 388 653 - -
Gso14g0406 1028 SMART LRR_typ_2 449 473 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 305 328 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 233 257 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 593 615 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 569 592 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 161 183 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 545 568 IPR003591 -
Gso14g0406 1028 SMART LRR_typ_2 185 209 IPR003591 -
Gso14g0406 1028 Pfam Leucine rich repeat 426 486 IPR001611 GO:0005515
Gso14g0406 1028 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Gso14g0406 1028 Pfam Leucine rich repeat 210 270 IPR001611 GO:0005515
Gso14g0406 1028 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
Gso14g0406 1028 ProSiteProfiles Leucine-rich repeat profile. 595 617 IPR001611 GO:0005515
Gso14g0406 1028 Gene3D Phosphorylase Kinase; domain 1 700 819 - -
Gso14g0406 1028 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1026 - -
Gso14g0406 1028 ProSitePatterns Tyrosine protein kinases specific active-site signature. 865 877 IPR008266 GO:0004672|GO:0006468
Gso14g0406 1028 Gene3D Ribonuclease Inhibitor 250 348 IPR032675 -
Gso14g0406 1028 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 1026 - -
Gso14g0406 1028 Gene3D Ribonuclease Inhibitor 362 663 IPR032675 -
Gso14g0406 1028 SUPERFAMILY Protein kinase-like (PK-like) 720 1006 IPR011009 -
Gso14g0406 1028 SUPERFAMILY L domain-like 90 228 - -
Gso14g0406 1028 Gene3D Ribonuclease Inhibitor 48 159 IPR032675 -
Gso14g0406 1028 Pfam Protein kinase domain 744 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0406 1028 Gene3D Ribonuclease Inhibitor 160 249 IPR032675 -
Gso14g0406 1028 ProSiteProfiles Protein kinase domain profile. 741 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0406 Gso-Chr14 3788731 3792272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0406 51 913 Receptor kinase-like Gene Family AT4G08850 43.126 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso14g0406 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0406 - - gmx:100305449 1877.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0406 14 3788731 3792272 Gso2g2283 2 47479336 47482708 GST