Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0373 ATGGGAGAAGGAAGTGACCATCAAGCTATGGCAGACAATGGAAATGCTGAATCTGGTGAAGGTGGAGTGCGTAGTGCTGAAAACAACTCTGGCTCTCATGTTCGGGTTGGGGTGTCTGAGCCATATGTGGGTAGGGAATTTGATTCTCAAGATGCTGCAAAGACTTTCTACAATGAGTATGGCAAACGAGTGGGTTTCAGCTGCAAAGCTGGCCCACATGGTCGTTCCACAGCTGATGGGGCAAATATGTTCCGGGAGTTTCTGTGTGGCAGGGAAGATTCGAAAAGAAAGCCTCCTGAAAGCTGCAATGCAATGATTAGAATCGAGCAGAATGGTCAAAATAAGTGGGTTGTTACAAAATTTATAAAGGAGCATAGCCATTCCATGGCTAGCGTTAGTAAGGTGCATAATATTCGGCCACGTAAACCCTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGTGGTATGATGTATGTATCTATGGATAAGAATTGCATTCCCACTAAGAATATTCAGGGAATTAAGAATACTCCCGCAGCTGTTGCTGTTGCTGAAACATATCAGCCGGTTAAAAGTCCTACAATGATGAATTATGCTGTTAGGCCAGCTACACGAAAGAGGACATTAGGGAAGGATGCTCACAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGATAATCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACTGCTTACAGTCATTTTGGTGATGCAGTTACTCTGGACACAACATACAGAATAACTCAATATGGAGTGCCATTTGCTCCATTCACTGGTGTAAACCATCATGGTCAGATGATTTTGTTTGGTTGTGCACTTCTTTTGGATGATTCTGAAGCTTCTTTTGTGTGGCTTTTTAAGACATTTCTGACAGCCATGAACGAACATTACCCTGTCTCTATCACTACTGATCAAGACAGAGCCATACAGACAGCTGTTTCACAAGTTTTTCCTCAAACACGCCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAAAAGGTGGCTCATGTATGCAACATGCATCCAAATTTTCAGATTGAACTTTATAATTGTATTAATCTGACGGAAACCATTGAGGAGTTTGATTCATCTTGGAATTTTATCATCAATAAATATGAACTCACGAAAAATGATTGGCTTCAGTCCTTGTACAGTGCTCGTGCTCAATGGGTTCCAGCATATTTTCGTGATTCATTTTTTGCAGCAATATCTCCTAATCAAGGATTTGATGGTTCTTTTTTTTATGGTTTTGTCAACCACCAGACAACATTACCACTGTTCTTTAGGCAGTATGAACAAGCTTTGGAGTGCTGGTTTGAAAAAGAATTAGAATCAGATTATGATACTATTTGTACAACCCCTGTTCTGAAGACACCTTCCCCGATGGAGAAGCAGGCTGCTAATCTCTATACGCGGAAAATATTTTCAAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACTGCCAACAGAATTGAAGAAGATGGAGAAAATAGCATATTCAGGGTTGCAAAATTTGAGGATGACCAAAAGGTGTATATTGTCACATTAAACCTTTCCGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTACCGTCTCATTACATTTTAAAACGGTGGACAAGAAATTCCAAAAGCAGTGCTGGATCAGTTGAACTTGCTGATGAATCACATGGACCCAAGTCTTTGACATCACGATATAGTAACCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCATTGACTGTGGAAACTTATGATACTGCAATTAGTGCTCTTAGAGAAAGTGGAAAGAAGATTTCTTTCATGAGGAGAAGTGTTGCTAAAGTTGCCCCACCCAGTCATCCAGTCAGTGGGACTGCTTATGATGACAGAAAATCCCCTACTTCAGCAGCAGATACAAACCCTCTGTTGTGGCCATTGCAGGATGAAACAACACAGAGGTTTAATCTTAATGATGATAGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACAAATGACCCCAGTGTCTCTCCAGCGAGATGATGGTCCACCTGAAATGGTGGTTTATCCATGTCTGAAATCATTGACGTGGGTAATGGAGAACAAGAACTCAACACCAGGGAATAGAGTAGCTGTTATCAGTCTTAAGTTGCAAGACTATAGCAGGATTCCTTCAACAGAATCAGAGGTTAGGTTTAATCTCTCAAAAGTTACCTTGGAACCATTGTTTAACCATATGGTCAACATCAGTGATCAGCTGTCCATACCAACTAGGAAGTTTGCTGTATTGAATCTCAAGCTTCCAGTCGCGGAGACAACTTCTGGTGCAAGTGAAGTTAAGTTTCAGGTGTCCAAGGACACATTGGGTGCTGTACTACGATCAATGGCCTATATCCGTGAGCAACTCTTGGGTCCTGGTGATGTACAGACAGAACCTATGTCAAAAAGGCCTCGGAAGTGA 2634 0.4119 MGEGSDHQAMADNGNAESGEGGVRSAENNSGSHVRVGVSEPYVGREFDSQDAAKTFYNEYGKRVGFSCKAGPHGRSTADGANMFREFLCGREDSKRKPPESCNAMIRIEQNGQNKWVVTKFIKEHSHSMASVSKVHNIRPRKPFSSVGRTMPETYQGVGLVPSGMMYVSMDKNCIPTKNIQGIKNTPAAVAVAETYQPVKSPTMMNYAVRPATRKRTLGKDAHNLLEYFKKMQAENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAVTLDTTYRITQYGVPFAPFTGVNHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNEHYPVSITTDQDRAIQTAVSQVFPQTRHCISKWHVLREGHEKVAHVCNMHPNFQIELYNCINLTETIEEFDSSWNFIINKYELTKNDWLQSLYSARAQWVPAYFRDSFFAAISPNQGFDGSFFYGFVNHQTTLPLFFRQYEQALECWFEKELESDYDTICTTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTANRIEEDGENSIFRVAKFEDDQKVYIVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNSKSSAGSVELADESHGPKSLTSRYSNLCWEAIKYAEEGALTVETYDTAISALRESGKKISFMRRSVAKVAPPSHPVSGTAYDDRKSPTSAADTNPLLWPLQDETTQRFNLNDDSTPVQSVADLNLPQMTPVSLQRDDGPPEMVVYPCLKSLTWVMENKNSTPGNRVAVISLKLQDYSRIPSTESEVRFNLSKVTLEPLFNHMVNISDQLSIPTRKFAVLNLKLPVAETTSGASEVKFQVSKDTLGAVLRSMAYIREQLLGPGDVQTEPMSKRPRK* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0373 877 Pfam MULE transposase domain 272 363 IPR018289 -
Gso14g0373 877 MobiDBLite consensus disorder prediction 672 697 - -
Gso14g0373 877 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 802 IPR031052 GO:0006355
Gso14g0373 877 MobiDBLite consensus disorder prediction 1 37 - -
Gso14g0373 877 Pfam FAR1 DNA-binding domain 55 129 IPR004330 -
Gso14g0373 877 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 30 802 - -
Gso14g0373 877 SMART 26again6 561 588 IPR006564 GO:0008270
Gso14g0373 877 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Gso14g0373 877 Pfam SWIM zinc finger 550 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0373 Gso-Chr14 3421664 3427281 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso14g0373 MULE 2.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0373 - - gmx:100786206 1775.76