Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0358 ATGGAAGATAAACTAGCAACAACAAGTGAAGGACAACCCATAAGATGTAAAGCTGCGATTTGTCGCAAGCCAGGTTCTCCATTGAGTATTGAGGAGATCATTGTGGCACCACCAATGCCTCGTGAAGCTCGGATTCGTGTTATATGCACTTCTCTTTGTCACAGCGATGTTACTTTTTGGAAAATGGAGGTCCCTCCTGCAATTTGTCCAAGAATTTTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGCTTAGGAGAGGATGTAACCGAAGTCACAAAAGGAGATGTGGTTGTTCCAATTTTCTTACCTGATTGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAACCTTTGTTCAAAGTTTCCTTTTGAGGTGTCTCCTTGGATGCCTAGACATGCCACCTCTAGATTCACGGATTTAAAAGGAGATATCATACACCATTTCTTGTTTGTGTCTAGTTTTAGCGAGTATACCGTGGTTGACATTGCTCATCTAACCAAGATTGATCCAGCAATACCACCCAACAGGGCATGCCTACTTAGTTGTGGTGTATCAACCGGGGTAGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGTCATTTTTGGGTTGGGAAGTATTGGATTAGCAGTTGCCGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGATGTCAACCCAGAAAAATATGAAACTGGAAAAAAGTTTGGACTCACTGACTTTGTCCATGCTGGAGAAAGTGAAAACAAATCTGTGAGCCAGGTTATCATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGAATGGCAACATTGGTGCAGGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAGCAATAGTTTTAGGAGTGGAGAAGCCGGGATCCATGTTGAGCCTTAGCTGTAATGAGGTCCTCCATAGTGGGAAGAGCCTCGTGGGGTGCTTATTTGGAGGACTCAAACCCAAGTCTGATGTACCTATTCTCCTTAAACGCTACATGGACAAGGAACTGAATTTGGATGAGTTTGTCACACATGAGGTGGAGTTCAAGGATATCAACAAAGCTTTTGATTTATTGATTGAAGGACAGTGCCTTCGGTGTGTGATTTGGATGGACAGATGA 1164 0.4424 MEDKLATTSEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTFWKMEVPPAICPRILGHEAVGVVESLGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRACLLSCGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKYETGKKFGLTDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGKAIVLGVEKPGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDKELNLDEFVTHEVEFKDINKAFDLLIEGQCLRCVIWMDR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0358 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Gso14g0358 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Gso14g0358 387 Pfam Zinc-binding dehydrogenase 212 335 IPR013149 -
Gso14g0358 387 Gene3D - 188 328 - -
Gso14g0358 387 PANTHER ALCOHOL DEHYDROGENASE 9 384 - -
Gso14g0358 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Gso14g0358 387 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 384 - -
Gso14g0358 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Gso14g0358 387 Gene3D - 19 380 - -
Gso14g0358 387 SUPERFAMILY GroES-like 9 194 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0358 Gso-Chr14 3231015 3234499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0358 41 209 Monolignol Biosynthesis Gene Families AT4G37970 27.059 1.29e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0358 K00121 - gmx:100806887 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0358 14 3231015 3234499 Gso2g2327 2 47866773 47870352 GST