Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0349 ATGGCTTCTTTCGGGCCAAATGGAACTGAAAATGAGGATTCGTTGCCTCCCCCACCTCCCGTTGTACCATCAGATGTTGTACCTGTTAAAGCTGAGCCGGAGAAGAAAAAGGCTTCAAGGTTTCCAATAGCCAGGCGTGGCCTTGCTTCAAAAGGGACGAAGCTGCAACTTCTCACCAATCACTACAGAGTGAACGTTGCAAACACTGATGGGCATTTTTATCAGTATAGTGTTGCTCTTTTTTATGATGATGGACGACCTGTGGAGGGTAAGGGTGTAGGGAGGAAGCTTCTGGACAGGGTGCATGAAACGTATGATTCTGAATTGAATGGGAAAGATTTTGCATATGATGGTGAGAAGACTCTGTTTACTCTCGGGTCTCTTGCTCGCAACAAGCTTGAGTTTACGGTTGTTCTGGAGGATGTTATTGCTACCAGAAACAATGGAAACTGCAGCCCAGAGGGCAATGGAGAACTGAATGAGAGTGACAAAAAGAGGATGAGGCGCCCTAATAGATCCAAGGCATTTAAAGTGGAACTTAGCTATGCTTCAAAGATTCCATTGCAGGCCATTGCCAATGCTCTACGTGGACAGGAATCTGAGAATTATCAAGAAGCAATAAGAGTGCTTGATATCATTTTGAGGCAACATGCTGCTAAGCAAGGGTGTTTGCTTGTGCGGCAATCGTTCTTTCACAACAATCCCAAGAATTTTGCTGATGTAGGAGGAGGTGTACTTGGTTGCAGGGGCTTCCACTCTAGTTTTAGAACTACTCAAAGTGGACTGTCTTTGAACATAGATGTCTCAACCACCATGATAATTACCCCTGGGCCTGTGGTTGACTTCCTAATATCCAATCAAAATGTGAGAGACCCCTTTTCACTTGATTGGGCAAAGGCCAAGAGGACATTAAAAAACCTGAGGATTAAATCGAGCCCATCTAATCAAGAATTCAAAATCACTGGGCTTAGTGAACTCCCTTGCAAAGATCAAATGTTTACATTGAAGAAAAAAGGTGGTGATGATGACACTGAGGAAGAAGTGACAGTATATGATTATTTTGTTAATATCCGCAAGATAGATCTTCGGTATTCTGGGGATCTCCCATGTATCAACGTTGGGAAACCAAAAAGGCCAACTTACATTCCTCTTGAGCTGTGTTCTTTGGTATCACTTCAACGTTATACAAAAGCACTATCCACACTTCAAAGGTCTTCATTGGTGGAGAAGTCCAGGCAGAAGCCACAAGAGAGGATGAGGGTCTTGTCTGATGCACTTAAAAGTAGCAATTATGGTTCTGAACCAATGCTACGCAATTGTGGAATCTCTATAAGCCCCAACTTTACTGAAGTTGAGGGTCGGGTTTTACAAGCTCCACGGTTGAAATTTGGTAATGGGGAGGACTTCAATCCTAGAAATGGGAGGTGGAACTTCAATAACAAGAAAATTGTCAAGCCAACTAAAATAGAAAGATGGGCTGTGGTTAACTTCTCTGCACGCTGTGATATACGAGGGCTTGTGAGGGATCTCATTAAGTGTGGTGGAATGAAAGGCATTGTGATAGATCAGCCGTTTGATGTGTTTGAAGAAAATGGTCAGTTTAGGCGTGCACCGCCAGTGGTTCGAGTTGAGAAGATGTTTGAGTTGGTCCAGTCAAAACTTCCTGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAGAGGAAAAATTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGGAATTGTGACTCAGTGTATAGCTCCGACAAGGGTCAATGACCAATATTTGACTAATGTTCTGTTGAAAATCAATGCTAAGCTTGGTGGTCTGAACTCAATGTTAGGCGTTGAGCATTCTCCTTCTATTCCTATTGTTTCTAGAGCGCCAACCATCATTATTGGCATGGATGTGTCTCATGGTTCGCCAGGGCAAACAGATATTCCTTCAATTGCTGCGGTGGTCAGCTCTAGAGAATGGCCTCTAATATCAAAGTATAGGGCCAGCGTCCGTACGCAGTCTCCAAAGATGGAAATGATTGATAATTTGTTCAAGAAAGTTTCCGACAAGGAGGATGAAGGCATAATGAGGGAGCTTCTACTTGATTTCTATACAAGTTCTGGAAATAGAAAGCCCGATAATATAATCATATTCAGGGATGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTGAACATTGAACTTGATCAAATTATCGAGGCTTGCAAGTTTTTAGATGAAAAGTGGAATCCCAAGTTTTTGGTGATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAACCTGGAGCTCCTGACAATGTTCCTCCTGGAACGGTAATTGATAACAAAATTTGTCATCCTCGGAATTATGATTTCTACATGTGTGCACATGCTGGAATGATTGGTACTAGCAGGCCTACACACTACCATGTTCTGTTAGACGAGATTGGCTTTTCACCTGATGATCTACAGGAGCTTGTGCATTCATTATCATATGTGTATCAGAGGAGCACAACTGCCATTTCTGTCGTTGCTCCAATATGCTATGCTCATCTGGCTGCAACTCAGATGGGTCAATTTATGAAATTTGAGGACAAATCTGAGACATCTTCAAGTCATGGTGGTTCTGGTATACCTGCTCCTCCCGTCCCTCAGTTGCCAAGATTGCAGGACAAAGTTTCGAGCTCAATGTTCTTTTGTTGA 2721 0.427 MASFGPNGTENEDSLPPPPPVVPSDVVPVKAEPEKKKASRFPIARRGLASKGTKLQLLTNHYRVNVANTDGHFYQYSVALFYDDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLGSLARNKLEFTVVLEDVIATRNNGNCSPEGNGELNESDKKRMRRPNRSKAFKVELSYASKIPLQAIANALRGQESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNNPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKSSPSNQEFKITGLSELPCKDQMFTLKKKGGDDDTEEEVTVYDYFVNIRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLSDALKSSNYGSEPMLRNCGISISPNFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVKPTKIERWAVVNFSARCDIRGLVRDLIKCGGMKGIVIDQPFDVFEENGQFRRAPPVVRVEKMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLGVEHSPSIPIVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDNLFKKVSDKEDEGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGSGIPAPPVPQLPRLQDKVSSSMFFC* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0349 906 Pfam N-terminal domain of argonaute 54 214 IPR032474 -
Gso14g0349 906 Pfam Argonaute linker 1 domain 226 274 IPR014811 -
Gso14g0349 906 SUPERFAMILY PAZ domain 271 431 IPR036085 GO:0005515
Gso14g0349 906 SMART DUF1785_2 224 276 IPR014811 -
Gso14g0349 906 CDD PAZ_argonaute_like 276 390 - -
Gso14g0349 906 Pfam Argonaute linker 2 domain 417 463 IPR032472 -
Gso14g0349 906 ProSiteProfiles Piwi domain profile. 560 868 IPR003165 GO:0003676
Gso14g0349 906 MobiDBLite consensus disorder prediction 1 37 - -
Gso14g0349 906 SMART Piwi_a_2 560 868 IPR003165 GO:0003676
Gso14g0349 906 ProSiteProfiles PAZ domain profile. 318 391 IPR003100 GO:0005515
Gso14g0349 906 MobiDBLite consensus disorder prediction 12 26 - -
Gso14g0349 906 Gene3D - 455 621 - -
Gso14g0349 906 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 905 - -
Gso14g0349 906 Pfam PAZ domain 280 407 IPR003100 GO:0005515
Gso14g0349 906 Gene3D paz domain 270 395 - -
Gso14g0349 906 SUPERFAMILY Ribonuclease H-like 544 866 IPR012337 -
Gso14g0349 906 MobiDBLite consensus disorder prediction 149 170 - -
Gso14g0349 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 905 - -
Gso14g0349 906 MobiDBLite consensus disorder prediction 870 894 - -
Gso14g0349 906 CDD Piwi_ago-like 435 862 IPR045246 -
Gso14g0349 906 Pfam Piwi domain 561 868 IPR003165 GO:0003676
Gso14g0349 906 Gene3D - 627 906 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0349 Gso-Chr14 3150043 3157872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0349 45 906 Eukaryotic Initiation Factors Gene Family AT5G43810 34.181 1.61e-157 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0349 K11593 - gmx:100779439 1791.55