Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0331 ATGAGGAAGAAGCTAGATACTCGTTTCCCTGCGGCTAGGATTAAGAAAATTATGCAAGCTGACGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTCTAGTCTCTAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATCAAACATATGAGATAACTTTGAGGAGGGGGGCAAAGACTATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGCTCTTCTGTTGCAACCGGTGATGACCATGCTGTCACTAAGAGGAGGAAAGTTGCCGGAGATGATGATAATGACAGCGACGAGGAACTCAAGAGAAATAAGAAGCCAGAGCCTGGACATAGCAGTGGCAGAGGAAGGGGTAGGGGTCGTGGCCGTGGAATCAGAACTGTAGATCAAGAGATGGGTTCACATGCCAAGTGTGAAGATGATTCTCATGTATTGAAGCAGAATGACAACCATCAAAGCAATGAAAGCATGGAAAATGCATCGGAACCTGCAGAAGTTAAGCAGAGTTTTCCAGTAAGCAAACCGACCGAAGTGTGCATTCGAAATTTTGACTTAAATTTGGACCCAGATGAGGATATGGATTCATTAGACACACCAACTTCTGTCCCAGCTAGTTCATCTGCAAAATCAGTGTCAGAAGAGAAGCATGAGGAATACCCTGGATGGCCCTTGTCTGATATGGAAAAAATGACCATTGATCCCATTCAACTAGCTAACATAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAG 825 0.4242 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDQTYEITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGSSVATGDDHAVTKRRKVAGDDDNDSDEELKRNKKPEPGHSSGRGRGRGRGRGIRTVDQEMGSHAKCEDDSHVLKQNDNHQSNESMENASEPAEVKQSFPVSKPTEVCIRNFDLNLDPDEDMDSLDTPTSVPASSSAKSVSEEKHEEYPGWPLSDMEKMTIDPIQLANINGRIDEDEEDYDEEM* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0331 274 MobiDBLite consensus disorder prediction 99 134 - -
Gso14g0331 274 MobiDBLite consensus disorder prediction 90 246 - -
Gso14g0331 274 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Gso14g0331 274 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 273 - -
Gso14g0331 274 MobiDBLite consensus disorder prediction 168 182 - -
Gso14g0331 274 PANTHER HISTONE SUPERFAMILY PROTEIN 1 273 - -
Gso14g0331 274 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Gso14g0331 274 SUPERFAMILY Histone-fold 18 88 IPR009072 GO:0046982
Gso14g0331 274 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0331 Gso-Chr14 2989239 2993144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0331 1 263 CCAAT-HAP5 Transcription Factor Family AT3G12480 44.178 1.00e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gso14g0331 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0331 K21752 - gmx:100779786 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0331 14 2989239 2993144 Gso2g2354 2 48127440 48131430 GST