Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0317 ATGGCTTCCAGATTGGAACAACAGCAACAACCCACCAATGTTGGTGGTGAGAATAAGCAGAAAAACATGGGCGGTGAAGGAAGAAACAGAAGGGTGCTGCAAGATATTGGGAATCTCGTGGGTAAACAAGGCCATGGAAATGGAATTAACGTGTCTAAACCTGTCACAAGGAACTTTCGTGCTCAACTATTGGCCAATGCACAAGCCGCAACAGAAAAGAATAAGAAATCAAGCACTGAAGTGAACAACGGAGCAGTGGTGGCAACTGATGGGGTTGGTGTTGGGAATTTTGTTCCTGCTAGAAAGGTGGGAGCAGCTAAGAAGCCTAAAGAAGAACCTGAAGTGATTGTGATTAGCTCTGATGATGAATCAGACGAAAAGCAAGCTGTGAAGGGAAAAAAGGCAAGGGAAAAATCTGCCATGAAGAATGCCAAGGCCTTCAGTTCTGTTCTCTCTGCTAGAAGCAAGGCTGCTTGCGGACTTCCAAGGGATTTTGTGATGAACATTGATGCAACTGACATGGACAATGAATTGGCAGCAGCCGAGTACATCGATGATATCTACAAATTTTACAAAGAGACTGAAGAAGATGGTTGTGTGCATGACTACATGGGTTCGCAGCCAGATATTAATGCCAAGATGAGGTCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGGAAGTTTGAGCTCATGCCAGAAACTCTTTATTTGACCTTGAACATTGTCGATCGGTTCCTGTCTGTGAAGGCTGTGCCTAGAAGGGAGCTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATGTTAGTGAACAAGTGTTGATGATGGAGAAAACAATCCTTAGGAAGCTTGAATGGTACTTAACAGTTCCAACACCCTATCACTTCTTGGTTAGGTATACCAAAGCCTCCACTCCGTCTGACAAAGAGATGGAGAACATGGTGTTTTTCCTTGCTGAACTTGGATTGATGCATTATCCTACTGTAATCTTGTACCGTCCTTCTCTGATTGCTGCTTCTGCTGTGTTTGCGGCTCGATGTACCCTTGGAAGGAGCCCTTTCTGGACAAACACTTTGATGCACTACACAGGCTACTCTGAGGAGCAACTAAGGGATTGCGCCAAAATCATGGCCAACCTTCATGCTGCTGCACCAGGAAGTAAGCTTAGGGCAGTTTACAAGAAATTCTCTAACTCGGATCTTTCTGCTGTTGCTCTTCTTTCTCCAGCAAAGGACTTGTCAGCACTGTCTTGA 1320 0.447 MASRLEQQQQPTNVGGENKQKNMGGEGRNRRVLQDIGNLVGKQGHGNGINVSKPVTRNFRAQLLANAQAATEKNKKSSTEVNNGAVVATDGVGVGNFVPARKVGAAKKPKEEPEVIVISSDDESDEKQAVKGKKAREKSAMKNAKAFSSVLSARSKAACGLPRDFVMNIDATDMDNELAAAEYIDDIYKFYKETEEDGCVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSVKAVPRRELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVSEQVLMMEKTILRKLEWYLTVPTPYHFLVRYTKASTPSDKEMENMVFFLAELGLMHYPTVILYRPSLIAASAVFAARCTLGRSPFWTNTLMHYTGYSEEQLRDCAKIMANLHAAAPGSKLRAVYKKFSNSDLSAVALLSPAKDLSALS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0317 439 PIRSF Cyclin_A_B_D_E 1 439 IPR039361 -
Gso14g0317 439 CDD CYCLIN 311 399 IPR013763 -
Gso14g0317 439 PANTHER CYCLINS 22 434 IPR039361 -
Gso14g0317 439 SMART Cyclin_C_2 313 432 IPR004367 -
Gso14g0317 439 SUPERFAMILY Cyclin-like 175 310 IPR036915 -
Gso14g0317 439 MobiDBLite consensus disorder prediction 1 19 - -
Gso14g0317 439 Pfam Cyclin, N-terminal domain 186 310 IPR006671 -
Gso14g0317 439 ProSitePatterns Cyclins signature. 215 246 IPR006671 -
Gso14g0317 439 SMART cyclin_7 317 401 IPR013763 -
Gso14g0317 439 SMART cyclin_7 220 304 IPR013763 -
Gso14g0317 439 MobiDBLite consensus disorder prediction 1 32 - -
Gso14g0317 439 SUPERFAMILY Cyclin-like 314 433 IPR036915 -
Gso14g0317 439 CDD CYCLIN 214 303 IPR013763 -
Gso14g0317 439 Gene3D - 200 311 - -
Gso14g0317 439 Pfam Cyclin, C-terminal domain 313 431 IPR004367 -
Gso14g0317 439 Gene3D - 186 428 - -
Gso14g0317 439 PANTHER CYCLIN-B1-4 22 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0317 Gso-Chr14 2876598 2879333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0317 94 436 Core Cell Cycle Gene Families AT2G26760 58.523 4.44e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0317 K21777 - gmx:547782 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0317 14 2876598 2879333 Gso2g2360 2 48173882 48176545 GST