Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0305 ATGGGCAACTGTTGCTCAGGTGGCACCAATGACACTGAGGACAAGGGAGAATCCAACCAACCAACCAACAACAACAATGGAGGTGGAGGCGGAGGCACAACTGCACCCGCAACCACCCCACCACCATCATCTAAGCCCAACCATCCTCCTTCCAAGCACTCGAAGCCGCCCGCGATCGGCCCCGTGCTTGGAAGGCCGATGGAGGACGTGAAAAGCACTTACAGCATGGGGAAAGAGCTGGGGAGAGGGCAGTTTGGTGTGACACATTTGTGCACACACAAGAGCACAGGGAAGCAATATGCATGCAAGACCATTGCCAAGAGAAAATTGGTTAACAAGGAGGACATAGAGGATGTTAAGAGGGAAGTGCAAATCATGCACCATCTCTCAGGGCAACCTAACATTGTGGAGCTTGTTAATGTGTATGAGGACAAACAATCTGTTCATTTGGTGATGGAGTTGTGTGCTGGGGGTGAACTCTTTGATCGTATCATTGCAAAGGGACATTACACTGAACGTGCTGCGGCTTCCTTGTTGAGAACCATTGTGCAGATTGTTCACACTTTCCATTCCATGGGGGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTTCTGTTGAACAAGGATGAAAATGCACCCCTCAAGGCCACTGATTTCGGTCTCTCTGTTTTTTACAAGCAAGGAGAGATGTTTAAGGACATTGTTGGCAGTGCATATTACATTGCACCTGAGGTCTTGAAAAGAAAATACGGGCCAGAAGTTGATATTTGGAGTATTGGTGTCATGTTATACATTCTTCTATGCGGTGTCCCTCCATTTTGGGCAGAATCAGAAAATGGGATATTCAATGCAATCCTACGAGGCCATATAGACTTTACAAGCGATCCATGGCCATCCATTTCCCCTGCAGCAAAAGATCTTGTAAGGAAAATGTTGCATTCGGATCCCAGGCAGAGGCTGACGTCCTACGAAGTTTTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAATGCAGTACTGAATAGGCTCAAACAGTTCAGAGCAATGAACCAATTCAAGAAAGTTGCTCTAAGGGTAATCGCAGGCTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTTGCAAAACAAGGGACTAAGCTAACAGAACAGGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAACGGAACCATAGATTATGATGAATTCATTACTGCAACAATGCACATGAACCGAATGAACAAAGAAGATCATCTTTATACTGCCTTCCAATACTTTGACAAAGATAACAGCGGGTACATTACAATTGAAGAATTAGAGCAGGCACTCGTCGAGTTTAACATGAATGATGGCAGGGACATGAAGGAAATCATTTCAGAAGTTGACGCAGATAATGATGGCCGAATTAACTATGATGAGTTTGCTGCAATGATGAACAAAGGAACCCTAGAAGTTGGTACCAAGAAGAGGCGTGACCCAACCTTATTATAG 1590 0.4522 MGNCCSGGTNDTEDKGESNQPTNNNNGGGGGGTTAPATTPPPSSKPNHPPSKHSKPPAIGPVLGRPMEDVKSTYSMGKELGRGQFGVTHLCTHKSTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVELVNVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTFHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHIDFTSDPWPSISPAAKDLVRKMLHSDPRQRLTSYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALVEFNMNDGRDMKEIISEVDADNDGRINYDEFAAMMNKGTLEVGTKKRRDPTLL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0305 529 SUPERFAMILY EF-hand 372 512 IPR011992 -
Gso14g0305 529 SUPERFAMILY Protein kinase-like (PK-like) 50 360 IPR011009 -
Gso14g0305 529 CDD STKc_CAMK 74 331 - -
Gso14g0305 529 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Gso14g0305 529 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Gso14g0305 529 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Gso14g0305 529 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0305 529 SMART efh_1 486 514 IPR002048 GO:0005509
Gso14g0305 529 SMART efh_1 451 479 IPR002048 GO:0005509
Gso14g0305 529 SMART efh_1 379 407 IPR002048 GO:0005509
Gso14g0305 529 SMART efh_1 415 443 IPR002048 GO:0005509
Gso14g0305 529 Gene3D - 373 441 - -
Gso14g0305 529 Gene3D - 350 511 - -
Gso14g0305 529 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Gso14g0305 529 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0305 529 MobiDBLite consensus disorder prediction 39 56 - -
Gso14g0305 529 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Gso14g0305 529 ProSiteProfiles EF-hand calcium-binding domain profile. 486 517 IPR002048 GO:0005509
Gso14g0305 529 MobiDBLite consensus disorder prediction 1 38 - -
Gso14g0305 529 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Gso14g0305 529 ProSitePatterns Protein kinases ATP-binding region signature. 80 107 IPR017441 GO:0005524
Gso14g0305 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gso14g0305 529 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Gso14g0305 529 MobiDBLite consensus disorder prediction 1 66 - -
Gso14g0305 529 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Gso14g0305 529 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Gso14g0305 529 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0305 529 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Gso14g0305 529 Pfam EF-hand domain pair 450 511 IPR002048 GO:0005509
Gso14g0305 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 520 - -
Gso14g0305 529 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 19 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0305 Gso-Chr14 2748299 2752703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0305 1 525 EF-hand Containing Proteins AT5G12180 80.000 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso14g0305 Pkinase 7.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0305 K13412 - gmx:100820422 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0305 14 2748299 2752703 Gso2g2371 2 48261892 48269103 GST