Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0297 ATGAATAGGTTTTGCTTTGAGGCTTTTGACAGGATAATGCGAGATATAATGGCATCTCAAAATAAGGACAACATTGATAAACCTTTTGGAGGTACGACAATAGAAGATCTATGCTTCTATAGTTCTACAGTTAGTTCTGTCTTTCCACCTACTATACACCCCACTTTTTTTTTATCAACAGAAGTAAACTATATATCATTACTTATATTGTCTCTTGATTTGAGAAGTAATCAAGGATTTTCAGTTGTGGCTACTACAAGGAGGTTACCTTCAGATTCTGGTGCCTTTGCGGACTGGGCAGCGACAGCTTCCTCCGGTGCTGGTGGTGGTGGCGGCCGCGCTGTCCCCGTCGACGACCTCTCCCTCGGCTTCAATGCGGGTCCTGCTGCCGCCGCCACCGGACCCACCGCCGGTATGTGGTCCACCCAAGCTAGGTCAATCAATTACCCCGAAATGGGGATGTTCGTCGTGGCGCCAGCTTCTTCCTTCCACCACCACCACCACCACCAGCCGCCGCAACACGATCCCTCTGTCATGGCGGATTCCCTTAACCCCGCCACTGCACTCGGCGTCGGCGTCGGCGTCATTCCTCTCCTCGCAGCCACGCCGTGCCTCGAATCCGACAACAACATCCTCGGAAGTAGGACACGTGGCGGCGGGGGAATTCAGCTATGGCAAGACCAACAACAACACCATCAAAGCCACTACATGAAGAAGCAGCTGCAGCAGGGTCTTCTCGACCATAATAGTAATACCAGTTCGGGGAATTTGATTCAGAACAGTGGCGAGGTAACTGCTTCTGGAACTAGTAGCGGCGGAACAACGTGCCAAGATTGTGGAAACCAGGCAAAGAAAGATTGTACCAACAGAAGGTGTAGAACCTGTTGCAAAAGCCGAGGCTTTGATTGTCCTACCCACGTTAAGAGCACTTGGGTCCCCGCCGCACGCCGGAGAGAGCGCCAGCTAATGACGTCGGCCACCGCAGCTGTCGCCGGTTCTAGTGGCTCCACTTCGGGCACTAAAAAACCTAGGCTCATTGCTTCACAAACCACAACAACTTCCCACACTTCCACTTCCAACACCACCCCTCCTAGAAGCTTTGACACTAGCTCTAGCCATCAAGATGCGGGGTTCAAAGAGTCATTACCTGGGCAAGTACGTGCACCAGCGGTTTTCAAGTGTGTAAGAGTGACGGCGGTGGAGGATGGGCAAGATGAGTATGCATATCAAGCTGTGGTGAAGATTGGTGGCCACGTGTTCAAAGGGTTTCTCTATGATCAAGGGGTGGAGAATAGGGATGTGTATCCTAACCTATCTGAGTTGCATTTGGGTGGTGGAAGTGGTGGTGCAGGAAGAAATGGGGTTTCATCTTCATCTCCAATGATGGATCCTAATGATGTTTATGCAGCTTCTGGTGGAGGGTTATTAGGGGGTTCTTCAGCATATGGTAATCCAATGAATTGA 1464 0.5068 MNRFCFEAFDRIMRDIMASQNKDNIDKPFGGTTIEDLCFYSSTVSSVFPPTIHPTFFLSTEVNYISLLILSLDLRSNQGFSVVATTRRLPSDSGAFADWAATASSGAGGGGGRAVPVDDLSLGFNAGPAAAATGPTAGMWSTQARSINYPEMGMFVVAPASSFHHHHHHQPPQHDPSVMADSLNPATALGVGVGVIPLLAATPCLESDNNILGSRTRGGGGIQLWQDQQQHHQSHYMKKQLQQGLLDHNSNTSSGNLIQNSGEVTASGTSSGGTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMTSATAAVAGSSGSTSGTKKPRLIASQTTTTSHTSTSNTTPPRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGFLYDQGVENRDVYPNLSELHLGGGSGGAGRNGVSSSSPMMDPNDVYAASGGGLLGGSSAYGNPMN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0297 487 MobiDBLite consensus disorder prediction 326 378 - -
Gso14g0297 487 MobiDBLite consensus disorder prediction 323 382 - -
Gso14g0297 487 MobiDBLite consensus disorder prediction 445 464 - -
Gso14g0297 487 MobiDBLite consensus disorder prediction 246 283 - -
Gso14g0297 487 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 151 487 IPR007818 GO:0003700|GO:0006355
Gso14g0297 487 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 275 317 IPR006510 -
Gso14g0297 487 Pfam Domain of unknown function (DUF702) 273 430 - -
Gso14g0297 487 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 382 429 IPR006511 -
Gso14g0297 487 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 151 487 - -
Gso14g0297 487 MobiDBLite consensus disorder prediction 246 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0297 Gso-Chr14 2623058 2646082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0297 83 467 C2H2 Transcription Factor Family AT5G12330 50.472 3.14e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gso14g0297 DUF702 1.9e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0297 - - gsj:114385228 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0297 14 2623058 2646082 Gso2g2380 2 48368721 48372436 GST