Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0294 ATGGAAGAATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCGGCCCAGCTTAAGGCCTTGGAGAATTTTTATAATGAGCACAAATACCCCACAGAGGAAATGAAATTAGTACTTGCTGAGGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGATGAAAGATGAAGCTGTTGCTAATGGGCGACAAGATCGTTCAAGTGGTGTCATCCAAGATCGTGGCAGTGGACTTGGGCAAGATTCATGCGGAAGCAGTAAGCATGCTGATCACAGGTATCTGGATCCTAAGGAGGTTGAGAGCCATGGCCTCTACAATCACGAATTGTCAGTTGCAGATATGACTCATGGATGTAGGAACCGTTATCCTGAAAATGTTAGCGGGGTGGATGACACATCATCTGAGAGCAGCTCATTTTTGCAAGAAAGGTTGTTTTCTCAAGGTCTGGATCCATATGATATGGAGCCTTCTAGACATCTTACACCTAACGGAGCTCTTCCACCCCTAAATCCCAAAGGTGCAGTTAACATGGGACACAAACCATCAGGATATTTGAAAGTGAAGGGCGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTATCTGGAAGATGGTCCACTACTTGGTATAGAATTCGATCTGCTTCCTCCAGGGGCATTTGAATGCCAAACTGCAGATCCAGCTAATGAACCATACTCTGCTACAAATCCTCTGCTTCTGAATTCTCCAGAAATCTCTGCTGCAAAAAGACAACCCAGTATTAGCTCTAGATATGATTCATATTATACTAAGTTTAGTTCCCAAGATCCGCATATGGAAGGAGCTGACTTTGGTTCCTTGCACGAAACTGATTTCCAGGATAAACAAGATAAGAAAGCGCGTCAGAATATAAAACAAAGGCAACCTTTATACGGTTATACCAATCATTTTCCTGGAAGGAACTCTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCACCAAGAGTCATAGAATGAGCACTAAACATGGTGTTGAGGGGATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTGCAGTTAAGCAGAAAGGCTTGATGCTGCATGGTTATGATAATATCAATCTAAAGAATATGCAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCGTAATTCCCGTGTTCCTATGGATACTGAAGAACGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGGGGACAGGAAAGCAAAAAATACATACTGCAATGTAGATGGAGCAGGGATGCTTTCAAATGAAATTATGGTTGCAAAACGAGCTAAAGTTGACATGCTTCAACAATACAATGTGAAAAAATCACCTGTTGCTGAGATGGAACAAAGGAAAATTCAGAGATCTGCTGCAGACTTGCCTTCTAGCTTTAGCGAGGATGAAACTGCTGACACCAATTCCTCACTGGATTATTAA 1584 0.4091 MEESSELQSEENKVSNEKNKKRKLKTPAQLKALENFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVADMTHGCRNRYPENVSGVDDTSSESSSFLQERLFSQGLDPYDMEPSRHLTPNGALPPLNPKGAVNMGHKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDLLPPGAFECQTADPANEPYSATNPLLLNSPEISAAKRQPSISSRYDSYYTKFSSQDPHMEGADFGSLHETDFQDKQDKKARQNIKQRQPLYGYTNHFPGRNSFPDLYEDSTGEASAYNSTKSHRMSTKHGVEGMRSDSASNHSDHYEEKLAVKQKGLMLHGYDNINLKNMQRSEHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKGDRKAKNTYCNVDGAGMLSNEIMVAKRAKVDMLQQYNVKKSPVAEMEQRKIQRSAADLPSSFSEDETADTNSSLDY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0294 527 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Gso14g0294 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 526 - -
Gso14g0294 527 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Gso14g0294 527 MobiDBLite consensus disorder prediction 7 23 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 314 340 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 1 28 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 352 384 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 495 527 - -
Gso14g0294 527 SMART HOX_1 18 80 IPR001356 GO:0003677
Gso14g0294 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 526 - -
Gso14g0294 527 CDD homeodomain 20 75 IPR001356 GO:0003677
Gso14g0294 527 MobiDBLite consensus disorder prediction 82 113 - -
Gso14g0294 527 Gene3D - 8 92 - -
Gso14g0294 527 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Gso14g0294 527 MobiDBLite consensus disorder prediction 88 106 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 505 527 - -
Gso14g0294 527 MobiDBLite consensus disorder prediction 414 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0294 Gso-Chr14 2588116 2596231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0294 3 526 Homeobox Transcription Factor Family AT4G03250 41.544 1.40e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gso14g0294 Homeodomain 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0294 - - gmx:100803515 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0294 14 2588116 2596231 Gso2g2382 2 48409359 48414992 GST
Gso8g2509 8 42285357 42290866 Gso14g0294 14 2588116 2596231 PCT
Gso14g0294 14 2588116 2596231 Gso8g2509 8 42285357 42290866 PCT