Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0287 ATGGGAACTCTAACTCTTGGCCTTGTACTTGTACTCCTCCTTTTGTGCTTAACTTGGCCTGCTTCTGTTTCTTCTCTTCCCATGTCTTTGAGAAGGCAAGCGTCTATCTTGGTTTCTCTGAAACAAGACTTTGAGGCCAACACTGATTCTTTGAGAAGCTGGAACATGTCTAACTACATGTCCCTTTGCAGTACCTGGGAGGGTATTCAGTGTGACCAAAAGAATAGGTCAGTGGTGTCATTGGACATATCCAACTTCAACCTTTCCGGCACACTTTCACCTTCCATCACAGGACTAAGGAGCCTTGTGAGTGTTTCACTTGCTGGTAATGGCTTCTCAGGAGGGTTCCCTAGTGAAATTCACAAGCTAGAATTGCTGAGATTCCTCAACATATCCGGCAACACGTTCAGTGGAGACATGGGATGGGAATTTTCTCAGTTGAGAGAGCTTGAAGTGCTTGATGCTTATGACAATGAGTTCAATTGCTCCCTCCCTCTTGGTGTCACTCAGCTCCCCAAGCTCAATAGCTTGAATTTTGGCGGGAACTATTTCTTTGGTGAAATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCAGGAAATGATTTGAGGGGTCTCATACCACCTGAGCTTGGGAATCTCACTAACCTGACACAGCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTGAGTTTGGTAAGTTGGTTAGTTTAACTCAAGTTGACCTTGCAAACTGTGGCTTGACAGGTCCAATTCCAGCTGAGTTGGGAAACCTCATCAAACTAGACACTCTCTTCTTGCAAACTAACCAGCTCAGTGGCTCAATCCCTCCCCAATTAGGCAACATGAGTAGCCTGAAGTGTCTTGATTTGTCAAACAATGAGCTCACAGGAGACATCCCTAATGAGTTCTCAGGCCTTCATAAGCTCACCCTCTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCTGAGCTGCCTAACTTGGAAGTGCTGAAGCTTTGGCAGAACAACTTCACAGGTGCCATTCCATCAAGGCTTGGCCAGAATGGCAAATTGGATGAGCTTGACCTGTCAACAAACAAGCTCACTGGATTGGTGCCTAAATCTCTATGCCTTGGGAGGAGACTGAGGATTTTGATCCTGCTCAACAATTTTCTCTTTGGATCTTTGCCTGCTGATCTTGGCCAATGCTACACACTCCAAAGAGTTCGTTTGGGACAGAACTATTTGACAGGATCGATACCAAATGGTTTTCTTTACTTGCCTGAGTTGGCCCTTTTGGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAAGAAACAAGCACTGCACCCTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTATCCGGCTCTCTACCAATTTCCATTGGAAACTTTCCCAACTTACAAATTCTGCTGCTTCATGGAAATAGACTCTCAGGAGAAATCCCTCCAGATATAGGGAGGCTGAAAAATATACTCAAGTTGGATATGAGTGTCAACAATTTTTCAGGTAGTATTCCTCCTGAGATAGGTAACTGTTTATTGCTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATCCCAGTTCAGCTTTCTCAAATTCACATAATGAACTATCTCAATGTCTCATGGAACCACCTAAGCCAAAGTCTTCCCAAGGAACTTGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTCTCAGTGCTTAACTCTACATCCTTTGTGGGAAATCCTCAGCTCTGTGGATATGATCTGAATCCATGTAAACACTCTTCAAATGCAGTATTGGAGTCACAAGACAGTGGCAGTGCAAGACCTGGAGTTCCTGGGAAGTATAAGCTTCTCTTTGCAGTGGCACTGTTGGCTTGTTCATTGGCATTTGCAACATTGGCCTTTATCAAGAGCAGAAAGCAAAGAAGGCACTCCAATTCATGGAAGCTCACAACATTTCAGAATCTGGAATTTGGAAGTGAAGACATCATAGGGTGCATAAAGGAAAGCAATGCCATAGGAAGGGGTGGAGCTGGGGTTGTATACCATGGAACAATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTCTTGGGAATCAACAAAGGATGTTCTCATGATAATGGCCTCTCAGCAGAAATAAGGACACTGGGAAGAATCAGGCACAGGTACATTGTGAGGTTGCTGGCATTTTGTTCAAATAGAGAGACCAATTTGCTTGTTTATGAGTACATGCCAAATGGAAGCTTAGGTGAAGTCTTGCATGGGAAGAGGGGAGAGTTTCTCAAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCACAGAGATGTGAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGGACATCAGAGTGCATGTCTTCCATTGCTGGTTCCTATGGTTACATTGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGCTGCTAGAACTACTAACAGGGAGAAGGCCAGTGGGGAATTTTGGTGAAGAAGGTCTAGATATTGTTCAATGGACCAAGTTGCAAACAAATTGGAGCAAAGACAAAGTGGTGAAGATTCTAGATGAGAGGCTATGTCACATTCCCGTAGATGAAGCAAAGCAGATATACTTTGTGGCCATGCTATGTGTTCAGGAACAAAGTGTGGAGCGACCAACTATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAACACATTCCAAAAGCAGTGA 2961 0.439 MGTLTLGLVLVLLLLCLTWPASVSSLPMSLRRQASILVSLKQDFEANTDSLRSWNMSNYMSLCSTWEGIQCDQKNRSVVSLDISNFNLSGTLSPSITGLRSLVSVSLAGNGFSGGFPSEIHKLELLRFLNISGNTFSGDMGWEFSQLRELEVLDAYDNEFNCSLPLGVTQLPKLNSLNFGGNYFFGEIPPSYGDMVQLNFLSLAGNDLRGLIPPELGNLTNLTQLFLGYYNQFDGGIPPEFGKLVSLTQVDLANCGLTGPIPAELGNLIKLDTLFLQTNQLSGSIPPQLGNMSSLKCLDLSNNELTGDIPNEFSGLHKLTLLNLFINRLHGEIPPFIAELPNLEVLKLWQNNFTGAIPSRLGQNGKLDELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSLPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELALLELQNNYLSGWLPQETSTAPSKLGQLNLSNNRLSGSLPISIGNFPNLQILLLHGNRLSGEIPPDIGRLKNILKLDMSVNNFSGSIPPEIGNCLLLTYLDLSQNQLSGPIPVQLSQIHIMNYLNVSWNHLSQSLPKELGAMKGLTSADFSHNDFSGSIPEEGQFSVLNSTSFVGNPQLCGYDLNPCKHSSNAVLESQDSGSARPGVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRHSNSWKLTTFQNLEFGSEDIIGCIKESNAIGRGGAGVVYHGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGNFGEEGLDIVQWTKLQTNWSKDKVVKILDERLCHIPVDEAKQIYFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQKQ* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0287 986 Gene3D Ribonuclease Inhibitor 143 230 IPR032675 -
Gso14g0287 986 SUPERFAMILY L domain-like 43 382 - -
Gso14g0287 986 Pfam Protein tyrosine and serine/threonine kinase 704 974 IPR001245 GO:0004672|GO:0006468
Gso14g0287 986 Gene3D Ribonuclease Inhibitor 231 385 IPR032675 -
Gso14g0287 986 SMART LRR_typ_2 436 460 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 485 509 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 292 315 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 340 364 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 365 387 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 268 291 IPR003591 -
Gso14g0287 986 SMART LRR_typ_2 195 219 IPR003591 -
Gso14g0287 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Gso14g0287 986 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 8 983 - -
Gso14g0287 986 Gene3D Ribonuclease Inhibitor 32 142 IPR032675 -
Gso14g0287 986 PANTHER UNNAMED PRODUCT 8 983 - -
Gso14g0287 986 Gene3D Ribonuclease Inhibitor 386 627 IPR032675 -
Gso14g0287 986 SUPERFAMILY L domain-like 311 628 - -
Gso14g0287 986 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Gso14g0287 986 Gene3D Transferase(Phosphotransferase) domain 1 780 986 - -
Gso14g0287 986 SMART serkin_6 702 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0287 986 SUPERFAMILY Protein kinase-like (PK-like) 696 974 IPR011009 -
Gso14g0287 986 Pfam Leucine rich repeat 270 329 IPR001611 GO:0005515
Gso14g0287 986 Gene3D Phosphorylase Kinase; domain 1 668 779 - -
Gso14g0287 986 ProSiteProfiles Leucine-rich repeat profile. 294 316 IPR001611 GO:0005515
Gso14g0287 986 ProSiteProfiles Protein kinase domain profile. 702 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0287 Gso-Chr14 2511960 2515992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0287 23 976 Receptor kinase-like Gene Family AT5G65700 58.351 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso14g0287 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0287 - - gmx:100816158 1919.05