Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0267 ATGGATAACTCATATGATTCATCCTCATCCTTGAGTTTCGTATCATCTCACCTGTCACATGGTTCTAGTAATCACAACGTGTCTTCCACCACCAGCAATGAGCATGGGGAAAATATTGAAATTTTGAGTCTGAATAAGCTCAGTGGAAGCCTTGAGAAGCTATTGATTGAGGTTGAGTATGATTATAGTGATGCTGAGATTCTTATTGAGGACATCCCTGTGGGTATTCATCGCTGTATATTGGCATCGCGTAGTCCGTTTTTTCATGAGCTTTTTAAGAAAGGGACTGATGGATCAGGGAAGGAAGGAAAGCCAAGGTATCTCATGTCAGATTTGATGCCTTATGGCACAGTTGGATATCAAGCTTTCCAAGTGTTCTTGTACTATCTGTATACTGGAAGGCTAAAGGCTTCACCAACAGAAGAGACAACATGTGTTGATGAAACATGTATCCATGTAGCATGCCGCCCTGCTATCAATCATGCCCTAGAGCTGATGTATGCTTCTGTGACTTTTCAGATGAAAGAGCTAGTTTTACTTTTTCAGCGGCATCTCCTAAATTTTGTTGAGAAGGCTCTTGTGGAAGATGTCATTCCTATTCTTATGGCTGCTTTCAACTGCCAACTAGACCAGCTTCTCTCTCGGTGCATTCAGAGAGTAGCAAGGTCTGACTTTGACAACACATCTTTGGAAAAAGAGCTCCCTCATGAAGTTTTGACTGAAATCAAATCACTCCGACTCCCATTTCAGCCAGAATCCACACCTAATGCAATGGAAGCGGAGTCCTTGAATGAAAAGAGTATCAGGAGAATCCACAAGGCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCTAGTGTCACTCTAGATGATGCATATGCCCTGCACTATGCTTGTGCCTATAGCGATTCTAAGGTTATTCAAGAAGTTCTTAGTCTAGGCATGGCTGATATTCTTCGTAGAAATTCCCGAGGATACACAGTTCTCCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTACTGAATAAAGGGGCACGTGCATCAGATACCACTCCAGATGGACAAACCGCTCTTGCAATTTGTCAGAGGTTGACAAGATGCAAGGATTATCATGAGAAAACAGTGCAGTGTAAGGAATCTAACAAGGACAGGCTTTGTGTTGATGTCCTGGAGAGGGAGATGAGAAGAAATTCTATGACTGTGAATATGTCTGTTTCATCACAGTTAACAGCTGATGATTTGCACATGAGACTGGATTACCTTGAGGATAGAGTTGCATTTGCTCGACTGTTGTTTCCTGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAAGCAGATTCATCATCACTGTATGCAAATTCATCGGCTTTGAAGGTCACAAATGGCAACCCGAAAGAAGTAGATCTAAATGAATCTCCCTCGGCTCGAACCAGAAAACTCCAGTTAAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCTGAAGTGCTTGATAAGTTTCTGGAAGACGACGAAATGCCAGATGTTTTCTTCCTAGAGAAGGGCAGTGAAGAAGAGCAGAGAATCAAAAAAGCACGCTTCATGGAGCTTAAAGATGATGTGCAAAAGGCATTTCACAAGGATATGGCTGAAAATAACCATTCTGGTTTTTCATCTACGGTGTCTTCCTCTTCTTCCTCAACTCGTAGGGAAGGTCTTAACCATAGAGTAAGGAGAAAATGA 1773 0.4258 MDNSYDSSSSLSFVSSHLSHGSSNHNVSSTTSNEHGENIEILSLNKLSGSLEKLLIEVEYDYSDAEILIEDIPVGIHRCILASRSPFFHELFKKGTDGSGKEGKPRYLMSDLMPYGTVGYQAFQVFLYYLYTGRLKASPTEETTCVDETCIHVACRPAINHALELMYASVTFQMKELVLLFQRHLLNFVEKALVEDVIPILMAAFNCQLDQLLSRCIQRVARSDFDNTSLEKELPHEVLTEIKSLRLPFQPESTPNAMEAESLNEKSIRRIHKALDSDDVELLKLLLNESSVTLDDAYALHYACAYSDSKVIQEVLSLGMADILRRNSRGYTVLHVAARRKDPSILVALLNKGARASDTTPDGQTALAICQRLTRCKDYHEKTVQCKESNKDRLCVDVLEREMRRNSMTVNMSVSSQLTADDLHMRLDYLEDRVAFARLLFPAEARVAIENAEADSSSLYANSSALKVTNGNPKEVDLNESPSARTRKLQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDEMPDVFFLEKGSEEEQRIKKARFMELKDDVQKAFHKDMAENNHSGFSSTVSSSSSSTRREGLNHRVRRK* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0267 590 MobiDBLite consensus disorder prediction 562 580 - -
Gso14g0267 590 Pfam BTB/POZ domain 61 142 IPR000210 GO:0005515
Gso14g0267 590 PANTHER REGULATORY PROTEIN NPR3 1 588 IPR044292 GO:0009862|GO:2000022|GO:2000031
Gso14g0267 590 SMART BTB_4 63 189 IPR000210 GO:0005515
Gso14g0267 590 ProSiteProfiles Ankyrin repeat region circular profile. 329 354 - -
Gso14g0267 590 MobiDBLite consensus disorder prediction 555 590 - -
Gso14g0267 590 CDD BTB_POZ_NPR_plant 45 189 - -
Gso14g0267 590 SUPERFAMILY POZ domain 60 187 IPR011333 -
Gso14g0267 590 Pfam Domain of unknown function (DUF3420) 224 272 IPR024228 -
Gso14g0267 590 SUPERFAMILY Ankyrin repeat 264 372 IPR036770 -
Gso14g0267 590 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 1 588 - -
Gso14g0267 590 Gene3D - 263 404 IPR036770 -
Gso14g0267 590 Gene3D Potassium Channel Kv1.1; Chain A 31 221 IPR011333 -
Gso14g0267 590 Pfam Ankyrin repeats (many copies) 321 369 IPR002110 GO:0005515
Gso14g0267 590 Pfam NPR1/NIM1 like defence protein C terminal 371 574 IPR021094 -
Gso14g0267 590 ProSiteProfiles BTB domain profile. 63 139 IPR000210 GO:0005515
Gso14g0267 590 ProSiteProfiles Ankyrin repeat profile. 329 361 IPR002110 GO:0005515
Gso14g0267 590 SMART ANK_2a 295 325 IPR002110 GO:0005515
Gso14g0267 590 SMART ANK_2a 329 358 IPR002110 GO:0005515
Gso14g0267 590 SMART ANK_2a 266 294 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0267 Gso-Chr14 2338925 2345590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso14g0267 NPR1_like_C 1.1e-83 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0267 K14508 - gmx:100814739 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0267 14 2338925 2345590 Gso2g2407 2 48655270 48659814 GST