Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0257 ATGGTTTTGAAGGTTTCTCTCATTGTGGTTCTGCTTGTGATATGCTCCTGTGTTGTGGAAGCCATTTCTAGGAATCACAATAATCACAATCACAACAATATCAACAAAAATGGATCTTCTCTGGCTGCCATAAAGTTTCCTGATCATCCAAGTTTCAGTGATGTCTCTTCTTCTGGGGACAATGATTGTAGCTTCTCAAATTCTGAGCAACTTGGGCATTCTGTACCTACCATGACATCAGGTGAAGAAACTGATGAAGAGAGTGAGGCTTTTCCAGCACCAAAACCACACAAGAATTCGGTGAAACTCCACTTGAAACACAGATCAGGGAGCAAAGGTGCTGAGCCTAAAAACTCTGTGATTGATTCCACAGTAAGAGATTTGACCAGAATTCAGAACCTTCACAGAAGGGTTATAGAAAATAGGAACCAAAACACCATTTCAAGGCTGCAGAGGTTACAGAAGGAGCAACCAAAGCAGTCCTTCAAGCCAGTGTTTGCTCCGGCCGCTTCACCGACAAGTCCAGTTTCCGGGCAGCTTGTGGCAACCTTGGAATCCGGGGTGAGTCTTGGCTCTGGTGAGTATTTCATGGATGTGTTTGTGGGGACACCCCCTAAGCATTTTTCTCTGATACTTGACACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGCATTGCATGTTTTGAGCAAAGTGGGCCATATTATGACCCCAAAGATTCTAGTTCTTTTAGGAATATAAGCTGTCATGATCCCCGGTGCCAATTGGTTTCATCCCCGGATCCACCTAATCCTTGCAAGGCTGAGAATCAGAGTTGTCCCTACTTTTATTGGTATGGGGATGGTTCCAATACAACTGGGGATTTTGCATTGGAGACTTTCACTGTTAATCTCACCACTCCTAATGGGAAGTCAGAGTTGAAGCATGTGGAGAATGTGATGTTTGGATGTGGTCATTGGAATAGAGGCCTATTTCATGGTGCTGCTGGTTTGCTAGGATTGGGGAAAGGACCATTGTCATTTGCTTCTCAAATGCAATCTCTCTATGGTCAATCCTTTTCCTATTGTCTTGTGGATAGGAATAGCAATGCAAGTGTTAGCAGCAAGTTGATTTTTGGTGAGGACAAGGAGCTCCTCAGCCACCCCAATTTGAATTTCACTTCTTTTGGTGGTGGGAAAGATGGTTCAGTTGACACATTTTACTATGTCCAGATAAATTCTGTTATGGTTGATGATGAGGTGCTGAAGATACCTGAGGAGACTTGGCATTTGTCTTCAGAAGGTGCTGGTGGTACCATAATTGATTCTGGCACCACTTTAACATATTTTGCTGAGCCTGCTTATGAGATTATCAAGGAGGCTTTTGTGAGGAAAATTAAGGGCTATGAACTTGTTGAAGGCCTTCCTCCTCTAAAGCCATGTTACAATGTGTCTGGAATTGAAAAGATGGAGCTACCTGACTTTGGAATCTTGTTTGCTGATGGAGCAGTGTGGAATTTTCCAGTGGAGAATTATTTTATCCAGATTGATCCTGATGTTGTTTGTTTGGCTATTTTGGGGAATCCTCGATCTGCCCTTTCAATAATTGGAAACTATCAGCAGCAGAATTTCCACATACTATATGATATGAAGAAATCCAGACTTGGCTATGCACCAATGAAGTGTGCTGATGTTCTTGTAGCAGTGGAACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAGCATCCTAAGATCTACCGCATGAAACTCTGGGCCACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTATTTTTTGAGAAAATTGAAGAAGGTTAAGAAAAGCAATGGACAAGTGCTAGCCATCAATGAGATTTTTGAGAAGAATCCTACCAAGATTAAGAATTATGGAATTTGGCTGCGCTATCAGAGCCGCACTGGTTATCACAATATGTACAAGGAATACCGAGATACAACTCTGAATGGTGCAGTTGAGCATATGTACACTGAAATGGCATCTCGTCATAGGGTGAGGCATCCATGCATCCAGATAATTAAGACTGCCACCATCCCAGCTAAGCTGTGCAAAAGGGAGAGCACCAAGCAGTTTCACAATTCTAAAATCAAGTTCCCATTGGTGTTCAAGAAGATTAGGCCTCCAACTAGGAAGCTGAAGACAACATACAAGGCATCCAGGCCAAACCTATTTATGTGA 2262 0.4328 MVLKVSLIVVLLVICSCVVEAISRNHNNHNHNNINKNGSSLAAIKFPDHPSFSDVSSSGDNDCSFSNSEQLGHSVPTMTSGEETDEESEAFPAPKPHKNSVKLHLKHRSGSKGAEPKNSVIDSTVRDLTRIQNLHRRVIENRNQNTISRLQRLQKEQPKQSFKPVFAPAASPTSPVSGQLVATLESGVSLGSGEYFMDVFVGTPPKHFSLILDTGSDLNWIQCVPCIACFEQSGPYYDPKDSSSFRNISCHDPRCQLVSSPDPPNPCKAENQSCPYFYWYGDGSNTTGDFALETFTVNLTTPNGKSELKHVENVMFGCGHWNRGLFHGAAGLLGLGKGPLSFASQMQSLYGQSFSYCLVDRNSNASVSSKLIFGEDKELLSHPNLNFTSFGGGKDGSVDTFYYVQINSVMVDDEVLKIPEETWHLSSEGAGGTIIDSGTTLTYFAEPAYEIIKEAFVRKIKGYELVEGLPPLKPCYNVSGIEKMELPDFGILFADGAVWNFPVENYFIQIDPDVVCLAILGNPRSALSIIGNYQQQNFHILYDMKKSRLGYAPMKCADVLVAVEQQLRSQSKSAEMVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYTEMASRHRVRHPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKIRPPTRKLKTTYKASRPNLFM* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0257 753 Hamap 50S ribosomal protein L18Ae [rpl18a]. 581 644 IPR028877 -
Gso14g0257 753 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 582 703 IPR023573 GO:0003735|GO:0005840|GO:0006412
Gso14g0257 753 ProSiteProfiles Peptidase family A1 domain profile. 195 552 IPR033121 -
Gso14g0257 753 MobiDBLite consensus disorder prediction 51 81 - -
Gso14g0257 753 Gene3D - 570 646 - -
Gso14g0257 753 Gene3D - 647 722 - -
Gso14g0257 753 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gso14g0257 753 Gene3D Acid Proteases 172 375 IPR021109 -
Gso14g0257 753 CDD pepsin_A_like_plant 194 556 IPR034161 -
Gso14g0257 753 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 44 558 - -
Gso14g0257 753 Pfam Xylanase inhibitor C-terminal 402 552 IPR032799 -
Gso14g0257 753 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 210 221 IPR001969 GO:0004190|GO:0006508
Gso14g0257 753 Pfam Xylanase inhibitor N-terminal 195 374 IPR032861 -
Gso14g0257 753 Coils Coil 136 156 - -
Gso14g0257 753 MobiDBLite consensus disorder prediction 51 120 - -
Gso14g0257 753 Gene3D Acid Proteases 376 562 IPR021109 -
Gso14g0257 753 PRINTS Pepsin (A1) aspartic protease family signature 201 221 IPR001461 GO:0004190|GO:0006508
Gso14g0257 753 PRINTS Pepsin (A1) aspartic protease family signature 433 444 IPR001461 GO:0004190|GO:0006508
Gso14g0257 753 PRINTS Pepsin (A1) aspartic protease family signature 528 543 IPR001461 GO:0004190|GO:0006508
Gso14g0257 753 PANTHER ASPARTYL PROTEASES 44 558 IPR001461 GO:0004190|GO:0006508
Gso14g0257 753 SUPERFAMILY Acid proteases 187 557 IPR021109 -
Gso14g0257 753 SUPERFAMILY RplX-like 646 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0257 Gso-Chr14 2239841 2246840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0257 575 753 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 89.944 9.52e-116 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0257 K22683 - zju:107416111 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0257 14 2239841 2246840 Gso2g2416 2 48761035 48767945 GST
Gso8g2554 8 42887180 42889671 Gso14g0257 14 2239841 2246840 PCT
Gso14g0257 14 2239841 2246840 Gso8g2554 8 42887180 42889671 PCT