Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0249 ATGATATTGATTGACTCGGTGCAACCAATTATGTCATCCAACAGTTCTTTGAATATGGAATTGTCAAAGAAGACGTCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTCGGTGCATTTATAGTGCTGATTTTGTGTATATTATCGATATGGGCGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTATTCTGTATCCCAAATACCAAATTTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCCTGTTCATGACAAGGCAAGTGACAAGAATTCAGATAATGTATCAGTTCATTTGGGAAATAGCAAATCTGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTGAGTTCAATGTCCGCCGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACGTTGTCACATGGAGGGCTGGCCACTGCCTCTCCTTTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCATTTCTCAAGCGAGAACATCATTGGCGAGGGTGGATATGGGATTGTTTACAGGGGCAGACTGGTTAATGGAACCGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGCCAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCACAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAGACATGCATCAATATGGAACACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACTGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGCGAAAGTCACATAACCACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCTAACAGCGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCGCGTCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAACGATGGTGGGGACACGGAGAGCTGAAGAAGTAGTGGACTCAAGCCTTCAAGTTAAACCACCACTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGCATAGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGACGAATATCCACTTCGAGAGGATAGAAGGAAAAGAAAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGGAATTTCTGAAAGCCACGTTGAAGAATAG 1551 0.4275 MILIDSVQPIMSSNSSLNMELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWAMFRRKSRRSLDKYSVSQIPNFSKDIDVDKVGVQSSHVQPENVVIPVHDKASDKNSDNVSVHLGNSKSGDPDNISQCSSIYHHERGLSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATNHFSSENIIGEGGYGIVYRGRLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQYGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKTMVGTRRAEEVVDSSLQVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPLREDRRKRKSGTASMEIETVKDISGPSDAEKMGISESHVEE* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0249 516 MobiDBLite consensus disorder prediction 103 129 - -
Gso14g0249 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Gso14g0249 516 MobiDBLite consensus disorder prediction 476 516 - -
Gso14g0249 516 MobiDBLite consensus disorder prediction 111 129 - -
Gso14g0249 516 ProSitePatterns Protein kinases ATP-binding region signature. 204 227 IPR017441 GO:0005524
Gso14g0249 516 ProSiteProfiles Protein kinase domain profile. 198 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0249 516 Gene3D Phosphorylase Kinase; domain 1 179 273 - -
Gso14g0249 516 Pfam Protein kinase domain 199 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0249 516 SUPERFAMILY Protein kinase-like (PK-like) 182 471 IPR011009 -
Gso14g0249 516 PANTHER RECEPTOR-LIKE KINASE PLANT 8 516 - -
Gso14g0249 516 PANTHER OS01G0323000 PROTEIN 8 516 - -
Gso14g0249 516 Coils Coil 218 238 - -
Gso14g0249 516 CDD STKc_IRAK 204 470 - -
Gso14g0249 516 SMART serkin_6 198 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0249 516 Gene3D Transferase(Phosphotransferase) domain 1 274 486 - -
Gso14g0249 516 MobiDBLite consensus disorder prediction 476 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0249 Gso-Chr14 2187583 2193044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0249 29 472 Trihelix Transcription Factor Family AT1G70460 39.866 6.10e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso14g0249 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0249 - - gmx:100798916 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0880 18 12149375 12154644 Gso14g0249 14 2187583 2193044 PCT
Gso8g2563 8 43079095 43084324 Gso14g0249 14 2187583 2193044 PCT
Gso14g0249 14 2187583 2193044 Gso18g0880 18 12149375 12154644 PCT
Gso14g0249 14 2187583 2193044 Gso8g2563 8 43079095 43084324 PCT