Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0248 ATGGAGAATGAGAAGGACCGTTTTTATGATCCCTTTCATTACAACCACCACCATGATCAGCAACTCAACCACTCATCATCAAGCTTTCCATTCTTTAGGGACAACAACAACAACTCAGCACCAATTGGCTCACAATTAAACTTTCAAGGGTTTGATGATCATAATAACCCTTCTTCTCATCATCACACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCAAGAGCCTTTGACATGTCTTGTTCATCTTCTGAAGTGATCTCCTCCAATATTGTTGAAAACCCCAAGAAGCCTAGTGCAGGAGGAGACTCTGTGGGGGTCAGTGGGAACCAACAATCAACACCTAATTCATCTGTGTCTTCATCATCCAATGAAGCTGAAGCAATCATAGAAGAAGACTCAACCAAGAGCCAGAAAGATAAGCAGCCAAAAGGGTGTGAAGAAGGAGATGAAAAGTCTAAGAAAGAGAACAAACCCAAAAAGAAAGAGAAAAAGCCAAGAGAGCCTCGCTTTTCCTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCGGTCAAGAATAGTCCATACCCAAGGAGCTATTATAGATGCACGAGTCAGAAGTGCGGTGTAAAGAAAAGGGTGGAGAGATCATTCCAGGACCCAACAATCGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGGGGCAGTGCTGCAAGCATGTTGTCATCACCTTCCTTTTTTGGTTCCTCTTATATGGCGTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCACCAAAATCCAATGTTTAACCAAAACCTTTCCCATAATCTCCATCCCCAGCCTCAACAGCAGCAGCAGTTCCAACTCTCTCGTGACTATGGTTTGTTGCAAGACCTACTACCATCATTCCCTGGCAAACAAGTGCCATGA 1008 0.4315 MENEKDRFYDPFHYNHHHDQQLNHSSSSFPFFRDNNNNSAPIGSQLNFQGFDDHNNPSSHHHTTFTDCLHGSMDYNTLSRAFDMSCSSSEVISSNIVENPKKPSAGGDSVGVSGNQQSTPNSSVSSSSNEAEAIIEEDSTKSQKDKQPKGCEEGDEKSKKENKPKKKEKKPREPRFSFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCGVKKRVERSFQDPTIVITTYEGQHNHHCPATLRGSAASMLSSPSFFGSSYMASSLPQDFLAQLLPSYSQNDHQNPMFNQNLSHNLHPQPQQQQQFQLSRDYGLLQDLLPSFPGKQVP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0248 335 MobiDBLite consensus disorder prediction 19 42 - -
Gso14g0248 335 Gene3D WRKY domain 159 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0248 335 ProSiteProfiles WRKY domain profile. 182 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0248 335 MobiDBLite consensus disorder prediction 134 181 - -
Gso14g0248 335 MobiDBLite consensus disorder prediction 289 310 - -
Gso14g0248 335 MobiDBLite consensus disorder prediction 109 133 - -
Gso14g0248 335 SUPERFAMILY WRKY DNA-binding domain 180 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0248 335 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 3 329 - -
Gso14g0248 335 MobiDBLite consensus disorder prediction 97 181 - -
Gso14g0248 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 329 IPR044810 GO:0003700
Gso14g0248 335 MobiDBLite consensus disorder prediction 21 42 - -
Gso14g0248 335 SMART WRKY_cls 187 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0248 335 Pfam WRKY DNA -binding domain 188 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0248 Gso-Chr14 2171673 2174472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0248 56 335 WRKY Transcription Factor Family AT4G18170 46.918 1.71e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g0248 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0248 - - gmx:100806016 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0248 14 2171673 2174472 Gso2g2425 2 48817315 48820093 GST