Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0246 ATGCACCTCATAGCCAACTTGGCCTTCAATAAAGGGAAGATTATCCTTCGCTCTTGCTCTGCACCATCTTTATTATTCACTGACACGGGGGTGGATTTTCAAGAGCCCTCTGAACCACACAAGTCATCAACTTCAATAGTGAAGCTATCTTTTCTTGGTGTTTTCTTGTATGTGGCAACTGGGGTGACAGTGTACATGACTAGTGGGAGTTTCAGGGGCAGTACCACTTTCAGGCCTGTAGATGCTGTGTACTTTACGATGGTAACTCTTTGCAATATTGGATATGTAGATATCGTTCCTGACTCCACGTTTACCAAGATATTTACATGTGCTTTCATTTTGGTGGGTTTTGGATTTCTTGGTTTTCTGCTCAATGGATTGGTTGCATACATTTGTGATATACAAGAGGCCTTCTTGTTGAGCATGGTGGATGAGAATAGATATAAGAAAATTCTCAGGACTTATATGGTTGATGAAGAGAAAGGAAGAATGAGGATAAGAACCAAATTCTGTCTGGCTTTGGCTGTTGTGATTGACTGCATTGCTATAGGAACAGTCACAGTGCACTTAGTTGAGGACCTGAATTGGGATGACAGTATTTATCTCTCCATTACTTCTGTTACAACGGTTGGTTATGGGGATTTTTCTCTCAGAACAGTAACCGGAAGATGCTTTGCAATTATATGGCTTTTGGTAAGCACACCGGCAGTTGCCAGGGCCTCTATATACCTCACTGAATATAGTATTCAAAAGAGAAATTGTAAGATGGCACAATGGGTTCTTCAGAAGAAGATAACATTATCAGATTTAGCAGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCTGACTTTGTCATATACAAGCTTTAG 876 0.4064 MHLIANLAFNKGKIILRSCSAPSLLFTDTGVDFQEPSEPHKSSTSIVKLSFLGVFLYVATGVTVYMTSGSFRGSTTFRPVDAVYFTMVTLCNIGYVDIVPDSTFTKIFTCAFILVGFGFLGFLLNGLVAYICDIQEAFLLSMVDENRYKKILRTYMVDEEKGRMRIRTKFCLALAVVIDCIAIGTVTVHLVEDLNWDDSIYLSITSVTTVGYGDFSLRTVTGRCFAIIWLLVSTPAVARASIYLTEYSIQKRNCKMAQWVLQKKITLSDLAAADLDNDGSISKSDFVIYKL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0246 291 SUPERFAMILY Voltage-gated potassium channels 146 252 - -
Gso14g0246 291 ProSitePatterns EF-hand calcium-binding domain. 274 286 IPR018247 -
Gso14g0246 291 PRINTS Two pore domain K+ channel signature 88 116 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0246 291 PRINTS Two pore domain K+ channel signature 208 217 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0246 291 Pfam Ion channel 177 238 IPR013099 -
Gso14g0246 291 Pfam Ion channel 55 130 IPR013099 -
Gso14g0246 291 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 7 291 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0246 291 PANTHER OS01G0696100 PROTEIN 7 291 - -
Gso14g0246 291 SUPERFAMILY Voltage-gated potassium channels 44 131 - -
Gso14g0246 291 Gene3D - 156 268 - -
Gso14g0246 291 Gene3D - 38 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0246 Gso-Chr14 2157638 2159893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0246 11 291 Ion Channels AT4G18160 44.561 7.86e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0246 K05389 - gmx:100789639 512.301