Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0240 ATGCAGCAAGATCAGAGAAAAAAGGGCTCAATGGAGATGGAATTTTTCTCCGATTATGGCGATGTCAGCAGGTACAAAATTCAAGAGGTCATTGGAAAAGGAAGCTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAAAAAGTAGCAATTAAAAAGATTCATGATATCTTTGAGCATGTATCTGATGCTGCGCGTATTCTGCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCTTTCAATGACACACCAACAACTGTGTTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAACTCTGTGGATCATTTTACTCAAGGTATACTCCAGCAATTGACATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAGCCTCTTTTCCCTGGGAAAAACGTTGTCCATCAGTTGGATCTGATGACAGATTTGCTTGGCACTCCCTCGCTGGATACTATATCCAAGGTACGCAATGATAAGGCACGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGACCCTTTAGCACTACGACTACTGGAAAGGTTGCTCGCCTTTGATCCAAAAGATCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTTCAAAGATTGAGAGGGAACCTTCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTCGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAATTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAGTTCAAACAGCAGTTTTCTCATCTCGAGGAAAATGGTGGTAAAAGTTATCCAATTATGCCACTTGAAAGAAAGCATGCATCACTTCCAAGGTCAACAATGGTACATTCAAATATGGTACCCTCGAAAGAGCAATCAAACATTGCTTCCTGCATAAACCGGCAGACAACTGGGGAATTTAATAATAATTCCAGGGATACAGAAAGTCCTGCGCCAAGGTCTATTCCGGGTCTGCAAAAATTTTCACAAGCAAAACCTGGAAAAGTTGTTGGGCCAGTGATTCCATACGAATATGCAAGTGTTGTCAAGGGTACATATGATCCAAGGACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTATCCTCCCTACGAATCATTATCAACGATCAACCTCTGGAAAACAAGAAAGGTCAGCAACAGAAGCTGACAAGGGTGTATCTTTACAATCAAAACTTGCTCAGCAATGTGGTGTGAATGCCAAAATAGCACCAGACACAGCTATCAATATTGACACCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGCCATTGAGACAAAGTTGCTGCAGTCAAAGGCTCATCAATATGGTGGGATTAGTACCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGCATGACAAGGTTGTTCTAG 1836 0.4031 MQQDQRKKGSMEMEFFSDYGDVSRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISKVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSKIEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKQQFSHLEENGGKSYPIMPLERKHASLPRSTMVHSNMVPSKEQSNIASCINRQTTGEFNNNSRDTESPAPRSIPGLQKFSQAKPGKVVGPVIPYEYASVVKGTYDPRTFMRGSVLPSQPILPTNHYQRSTSGKQERSATEADKGVSLQSKLAQQCGVNAKIAPDTAINIDTNPFFMTRAGVNKIEQDDRIAIETKLLQSKAHQYGGISTTAHRKVGPVQYGMTRLF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0240 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 493 - -
Gso14g0240 611 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0240 611 MobiDBLite consensus disorder prediction 505 528 - -
Gso14g0240 611 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gso14g0240 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 493 - -
Gso14g0240 611 MobiDBLite consensus disorder prediction 440 462 - -
Gso14g0240 611 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso14g0240 611 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso14g0240 611 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0240 611 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Gso14g0240 611 MobiDBLite consensus disorder prediction 505 519 - -
Gso14g0240 611 CDD STKc_TDY_MAPK 24 361 - -
Gso14g0240 611 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Gso14g0240 611 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0240 Gso-Chr14 2094007 2100003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0240 1 440 MAP Kinase Gene Family AT2G42880 86.230 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso14g0240 Pkinase 8.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0240 - - gmx:100781115 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0240 14 2094007 2100003 Gso2g2432 2 48881338 48888189 GST
Gso18g0871 18 11951086 11957724 Gso14g0240 14 2094007 2100003 PCT
Gso8g2569 8 43175864 43182594 Gso14g0240 14 2094007 2100003 PCT
Gso14g0240 14 2094007 2100003 Gso18g0871 18 11951086 11957724 PCT
Gso14g0240 14 2094007 2100003 Gso8g2569 8 43175864 43182594 PCT