Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0229 ATGGAAGCCAAGAAGCTCCACCCTCGCTTCTCGCTCGGCCGCCAATCCTCCCTCGCGCCGGAGCGTGCCGGCGCCGGCGACTCGTCGGAGACCCTGGACCCGGCGGTCCGGTTGATGTATCTGGCCAACGAAGGTGACTCGGACGGGATTAAGGAGCTTTTGGACGCCGGGAGTAACGTCAATTTCACCGACATCGACGGCCGCACCTCTCTCCACGTCGCCGCTTGCCAGGGCCGCACCGACGTCGTTGACTTGCTGCTCCGACGAGGCGCCCACGTCGATCCACAAGACCGCTGGGGCAGCACCCCTCTAGTTGATGCAATGTACTACAAGAATCACCAAGTTGTCAAGCTTTTGGAGAAACACGGTGCAAGACCCCCTATGGCTCCCATGCATGTGCAGAATGCTCGTGAAGTACCTGAGTATGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACTTTCAGGATTGCATTATGGCGTGGAATTCAGGTTGCTGTCAAGACACTTGGGGAGGAATTGTTCACTGATGATGACAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTAACACAAAGCACACCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTCGGTGCCTACTTGAAGCGGAAAGGTGCATTAAAACCAGTAACCGCCGTAAAGTTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCATGAACATAAACCAGAAGCCATTATACACAGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTTGCTAAAATGGTCAAAGAAGACAAACCCGTGGCAAGCCTGGATACATCATGGCGTTATGTTGCTCCAGAGGTATATAGAAATGAGGAATACGACACAAATGTGGATGTATTTTCATTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCGTTTTTTGCAAAGCCAGAAAATGAAGTTCCTAAAGCATATGTTGAAAATGAGCGTCCACCATTTAGAGCTTCACCAAAGCTTTATGCTTATGGGCTAAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCATACAGAAGGCCAACATTTAGGCAAATAATTGGGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGGTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAATCGCACAAATCCAAGTAGCCGATCATCTCGCTCTACGGCCAGATAA 1362 0.4736 MEAKKLHPRFSLGRQSSLAPERAGAGDSSETLDPAVRLMYLANEGDSDGIKELLDAGSNVNFTDIDGRTSLHVAACQGRTDVVDLLLRRGAHVDPQDRWGSTPLVDAMYYKNHQVVKLLEKHGARPPMAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGIQVAVKTLGEELFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLGAYLKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKMVKEDKPVASLDTSWRYVAPEVYRNEEYDTNVDVFSFALILQEMIEGCPPFFAKPENEVPKAYVENERPPFRASPKLYAYGLKQLIEECWDEKPYRRPTFRQIIGRLEDIYYHLAQKRGWKVRTPGCFQNLEAIFRGNRTNPSSRSSRSTAR* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0229 453 CDD STKc_MAP3K-like 165 408 - -
Gso14g0229 453 Gene3D Transferase(Phosphotransferase) domain 1 154 417 - -
Gso14g0229 453 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Gso14g0229 453 PIRSF ILK 2 431 - -
Gso14g0229 453 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Gso14g0229 453 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 435 - -
Gso14g0229 453 SUPERFAMILY Protein kinase-like (PK-like) 156 409 IPR011009 -
Gso14g0229 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 435 - -
Gso14g0229 453 ProSiteProfiles Protein kinase domain profile. 116 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0229 453 Gene3D - 17 153 IPR036770 -
Gso14g0229 453 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Gso14g0229 453 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Gso14g0229 453 Pfam Protein tyrosine and serine/threonine kinase 168 407 IPR001245 GO:0004672|GO:0006468
Gso14g0229 453 SMART ANK_2a 99 128 IPR002110 GO:0005515
Gso14g0229 453 SMART ANK_2a 33 62 IPR002110 GO:0005515
Gso14g0229 453 SMART ANK_2a 66 97 IPR002110 GO:0005515
Gso14g0229 453 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0229 Gso-Chr14 1978029 1982868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0229 1 429 MAP Kinase Kinase Kinase AT4G18950 64.840 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gso14g0229 PK_Tyr_Ser-Thr 8.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0229 - - gmx:100812598 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0229 14 1978029 1982868 Gso2g2444 2 48988306 48993357 GST
Gso14g0229 14 1978029 1982868 Gso4g0816 4 8466865 8474669 PCT