Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0212 ATGAGTTTCTTTTCATGTTGCACGTCACAAGAGAAGATCGACAAGAACTCATTGAAAAAGAGCAGTAAGAACTACCATCACGCAAAAGCTCTGCCGTCGTTAGCCAACATGTGTTTTAAATCTGATACCAGCAAACGGAAGTACATAGAAGAAGAAATAGCAAAAATTGGGAAAGGGAATATTACCTCTCAGACTTTTTCTTATCACGAGCTATGTGTTGCAACTCGGAACTTTCACCCTGACAATATGATTGGCGAAGGAGGCTTTGGAAGGGTGTACAAAGGACGCCTCAAAAGCATAAATCAGGTTGTTGCTGTGAAGAAACTTAATAGAAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGCGCAGATGGTGATCAAAGGATTTTGGTATACGAGTACATGGTGAATGGCTCTTTAGAAGATCACCTTCTTGAACTATCTCCGGACAGAAAGCCTTTGGATTGGCGTACTAGAATGAACATTGCAGCCGGTGCAGCTAAAGGACTTGAATATTTACATGAAGTAGCAAATCCGCCTGTGATATACCGTGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAACCCTAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTAATGGGAACTTATGGCTACTGTGCACCTGAGTATGCCTCAACAGGTCAATTGACTACAAAATCAGATATATATAGCTTTGGAGTAGTGTTTCTAGAGATGATCACAGGAAGAAGAGCAATTGATCAGTCAAGACCATCTGAAGAGCAAAACTTGGTCACTTGGGCACAACCACTATTCAAAGACAGAAGGAAATTTTCATCAATGGTTGATCCATTGCTGAAAGGGAACTACCCAACAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGTATTCAGGAGGAAGCTGATACCCGACCTTTGATTAGTGACGTAGTTACAGCTCTTGATGTTTTAGCAAAGAGGCATATACAAGTGGGAAGACAACACCGTTCAAAAGAGACTTTTTTCGAGCATGGGGAATGTAGTTAA 1140 0.4105 MSFFSCCTSQEKIDKNSLKKSSKNYHHAKALPSLANMCFKSDTSKRKYIEEEIAKIGKGNITSQTFSYHELCVATRNFHPDNMIGEGGFGRVYKGRLKSINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGDQRILVYEYMVNGSLEDHLLELSPDRKPLDWRTRMNIAAGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRAIDQSRPSEEQNLVTWAQPLFKDRRKFSSMVDPLLKGNYPTKGLHQALAVAAMCIQEEADTRPLISDVVTALDVLAKRHIQVGRQHRSKETFFEHGECS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0212 379 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Gso14g0212 379 Pfam Protein kinase domain 79 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0212 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso14g0212 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Gso14g0212 379 SUPERFAMILY Protein kinase-like (PK-like) 64 357 IPR011009 -
Gso14g0212 379 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 379 - -
Gso14g0212 379 CDD STKc_IRAK 84 353 - -
Gso14g0212 379 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Gso14g0212 379 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0212 379 PANTHER OS07G0668900 PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0212 Gso-Chr14 1859270 1862772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0212 60 356 Glycoside Hydrolase AT3G07070 71.717 2.50e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso14g0212 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0212 - - gmx:100798032 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0212 14 1859270 1862772 Gso2g2457 2 49089009 49092462 GST
Gso8g2600 8 43640055 43643488 Gso14g0212 14 1859270 1862772 PCT
Gso14g0212 14 1859270 1862772 Gso8g2600 8 43640055 43643488 PCT