Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0179 ATGGCGAACTTGCCCCAATCCATCTCCACAAGCGGCGCGACGTCGTTTGGAGCTTCTTCTGCCACCGCCAAGGATCGCAGCAGGATAGCGTCTGTGGAACACCTCGTTCTCCAACTCAACAACCCCGATCTCCGAGAAAACGCTCTCCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTTGCTCCATTATTGTGGAATTCTTTTGGTACCATGTCAGCACTTTTACAGGAAATAGTTTCAATATTCCCTGTTATTTCACCTCCAAACCTTACTCCAGCACAATCAACTCGAGTGTGCAATGCTCTTGCTCTTTTTCAGTGTGTGGCATCTCACCTTGATACAAGGATGCAATTCCTCCATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACCAGTAAGTCCAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGAGTCATTGGTGCCTTAGTGAAGGTTGATGATACAAAAGTTATAAGTTTCCTTCTTTCAACAGAGATTATTCCGTTGTGCCTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACTGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGACGAAATTGGTTTGAAATATATTTGTACTACAGCAGAGCGCTTTTATGCAGTAGCTCAAGTTTTGGGAAACATGGTGGAAACTCTTGTTGAGCAACCTTCAAGTCGTCTTTTGAAGCACATTATTCGTTGTTATCTTCGTCTGTCAGATAATCAGAGTGCTTGCAAGGCATTAAGAACCTGTCTTCCAGACATGTTAAGAGATGCTACATTCAGTAATTGCCTTCGTGAAGACCCAACAGCTAGGATGTGGCTACAGCAGTTGCTTCATAATATTGGAGACAATCGGGTTCCTGCACTACAAGGTGGAGGAGGATTCGATCGTATGATGGGGTCGTGA 942 0.4342 MANLPQSISTSGATSFGASSATAKDRSRIASVEHLVLQLNNPDLRENALHELSKKRELFQDLAPLLWNSFGTMSALLQEIVSIFPVISPPNLTPAQSTRVCNALALFQCVASHLDTRMQFLHAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTKVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVAQVLGNMVETLVEQPSSRLLKHIIRCYLRLSDNQSACKALRTCLPDMLRDATFSNCLREDPTARMWLQQLLHNIGDNRVPALQGGGGFDRMMGS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0179 313 Pfam Cell differentiation family, Rcd1-like 35 293 - -
Gso14g0179 313 PANTHER UNCHARACTERIZED 1 311 - -
Gso14g0179 313 SUPERFAMILY ARM repeat 40 294 IPR016024 -
Gso14g0179 313 Gene3D - 29 298 IPR011989 -
Gso14g0179 313 PANTHER BNAA05G20110D PROTEIN 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0179 Gso-Chr14 1573756 1578512 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gso14g0179 Rcd1 7.2e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0179 K12606 - gmx:100792752 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0179 14 1573756 1578512 Gso2g2487 2 49327380 49331917 GST
Gso18g0760 18 9229542 9238814 Gso14g0179 14 1573756 1578512 PCT
Gso8g2646 8 44126708 44134936 Gso14g0179 14 1573756 1578512 PCT
Gso14g0179 14 1573756 1578512 Gso18g0760 18 9229542 9238814 PCT
Gso14g0179 14 1573756 1578512 Gso8g2646 8 44126708 44134936 PCT