Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0175 ATGTCTGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGCCCTTCAGATTGCATTTTCTCTCCATATTTTCCTGCCAATGATCCTGAAAGATTTGCTCGTGTTCACAGAATCTATGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATACCATCATACTTACGGGAACAAGCTGCAAATTCTTTGTATTTTGAAGCACAATGTAGGATTCAAGACCCTGTTTATGGATGTGCTGGGATTATCTCTAAATTATATGAACAAATCAACAGTACAGAAATTGCACTTGCCCATGTCCAAACTCAAATTGCTTGTCAAAAGCTTCAAGTCCCACAGGCAAAAGCTGAATCAAACTTCAATGTCTTTCCAGCACAAAACAGTAGCACAGCAGAATTTCAATGGGAAAGTCAAGTTCCTTGGTTTAATTAA 432 0.3889 MSGRCAACKNQRRRCPSDCIFSPYFPANDPERFARVHRIYGGSNVGKMLQQIPSYLREQAANSLYFEAQCRIQDPVYGCAGIISKLYEQINSTEIALAHVQTQIACQKLQVPQAKAESNFNVFPAQNSSTAEFQWESQVPWFN* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0175 143 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 117 - -
Gso14g0175 143 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Gso14g0175 143 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Gso14g0175 143 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0175 Gso-Chr14 1538088 1538724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0175 4 115 AS2 family AT3G26660 58.929 1.09e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso14g0175 LOB 8.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0175 - - gmx:100790640 300.441